Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AL022313.4-201ENST00000562756 2046 ntBASIC19■□□□□ 0.63
CCDC27Q2M243 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC19■□□□□ 0.63
CCDC27Q2M243 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19■□□□□ 0.63
CCDC27Q2M243 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19■□□□□ 0.63
CCDC27Q2M243 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC27Q2M243 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19■□□□□ 0.63
CCDC27Q2M243 AL132994.2-201ENST00000603120 687 ntBASIC19■□□□□ 0.63
CCDC27Q2M243 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CCDC27Q2M243 MIR6869-201ENST00000619434 62 ntBASIC19■□□□□ 0.63
CCDC27Q2M243 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19■□□□□ 0.63
CCDC27Q2M243 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC27Q2M243 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC19■□□□□ 0.63
CCDC27Q2M243 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC27Q2M243 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC27Q2M243 TUBB8P4-201ENST00000511806 1324 ntBASIC19■□□□□ 0.63
CCDC27Q2M243 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC078875.1-201ENST00000431907 724 ntBASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC244107.1-201ENST00000442033 332 ntBASIC18.99■□□□□ 0.63
CCDC27Q2M243 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC104306.2-201ENST00000451877 341 ntBASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC104073.2-201ENST00000453737 312 ntBASIC18.99■□□□□ 0.63
CCDC27Q2M243 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC009779.1-201ENST00000551138 283 ntBASIC18.99■□□□□ 0.63
CCDC27Q2M243 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC090164.2-201ENST00000611487 516 ntBASIC18.99■□□□□ 0.63
CCDC27Q2M243 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.99■□□□□ 0.63
CCDC27Q2M243 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC27Q2M243 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC27Q2M243 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 CICP16-201ENST00000502609 2813 ntBASIC18.98■□□□□ 0.63
CCDC27Q2M243 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 AC063926.3-201ENST00000624734 5658 ntBASIC18.98■□□□□ 0.63
CCDC27Q2M243 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 BRWD1P1-201ENST00000401091 371 ntBASIC18.98■□□□□ 0.63
CCDC27Q2M243 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 MARK2P5-201ENST00000507649 634 ntBASIC18.98■□□□□ 0.63
CCDC27Q2M243 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 AC008805.1-201ENST00000590892 364 ntBASIC18.98■□□□□ 0.63
CCDC27Q2M243 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC27Q2M243 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC27Q2M243 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms