Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE4BQ07343 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE4BQ07343 OR2I1P-209ENST00000641730 5365 ntBASIC17.36■□□□□ 0.37
PDE4BQ07343 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
PDE4BQ07343 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE4BQ07343 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PDE4BQ07343 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.36■□□□□ 0.37
PDE4BQ07343 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PDE4BQ07343 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PDE4BQ07343 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE4BQ07343 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PDE4BQ07343 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 AC016700.1-201ENST00000429424 312 ntBASIC17.35■□□□□ 0.37
PDE4BQ07343 CALR4P-201ENST00000431943 946 ntBASIC17.35■□□□□ 0.37
PDE4BQ07343 VDAC1P1-201ENST00000439229 848 ntBASIC17.35■□□□□ 0.37
PDE4BQ07343 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 HLA-J-204ENST00000495278 958 ntBASIC17.35■□□□□ 0.37
PDE4BQ07343 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE4BQ07343 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE4BQ07343 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.35■□□□□ 0.37
PDE4BQ07343 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 AL133338.1-201ENST00000565695 1517 ntBASIC17.35■□□□□ 0.37
PDE4BQ07343 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PDE4BQ07343 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE4BQ07343 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE4BQ07343 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PDE4BQ07343 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE4BQ07343 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
PDE4BQ07343 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PDE4BQ07343 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PDE4BQ07343 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
PDE4BQ07343 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.34■□□□□ 0.37
PDE4BQ07343 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 MARK2P5-201ENST00000507649 634 ntBASIC17.34■□□□□ 0.37
PDE4BQ07343 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.34■□□□□ 0.37
PDE4BQ07343 SNORD3B-2-202ENST00000571722 791 ntBASIC17.34■□□□□ 0.37
PDE4BQ07343 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE4BQ07343 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 AC144522.1-201ENST00000625111 1658 ntBASIC17.34■□□□□ 0.37
PDE4BQ07343 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PDE4BQ07343 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PDE4BQ07343 AC139749.1-202ENST00000617529 3139 ntBASIC17.34■□□□□ 0.37
PDE4BQ07343 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE4BQ07343 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms