Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.7■□□□□ 0.1
CDR2Q01850 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.7■□□□□ 0.1
CDR2Q01850 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.7■□□□□ 0.1
CDR2Q01850 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CDR2Q01850 SORD2P-201ENST00000558556 1069 ntBASIC15.7■□□□□ 0.1
CDR2Q01850 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.7■□□□□ 0.1
CDR2Q01850 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.7■□□□□ 0.1
CDR2Q01850 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.7■□□□□ 0.1
CDR2Q01850 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 AC138951.2-201ENST00000623455 1161 ntBASIC15.7■□□□□ 0.1
CDR2Q01850 AC002472.3-201ENST00000640124 621 ntBASIC15.7■□□□□ 0.1
CDR2Q01850 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.7■□□□□ 0.1
CDR2Q01850 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.7■□□□□ 0.1
CDR2Q01850 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDR2Q01850 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDR2Q01850 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.7■□□□□ 0.1
CDR2Q01850 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.69■□□□□ 0.1
CDR2Q01850 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.69■□□□□ 0.1
CDR2Q01850 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDR2Q01850 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.69■□□□□ 0.1
CDR2Q01850 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDR2Q01850 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CDR2Q01850 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.69■□□□□ 0.1
CDR2Q01850 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 MIR4683-201ENST00000579659 81 ntBASIC15.69■□□□□ 0.1
CDR2Q01850 RN7SL713P-201ENST00000582127 302 ntBASIC15.69■□□□□ 0.1
CDR2Q01850 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 AC073413.1-201ENST00000603927 732 ntBASIC15.69■□□□□ 0.1
CDR2Q01850 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.69■□□□□ 0.1
CDR2Q01850 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDR2Q01850 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.69■□□□□ 0.1
CDR2Q01850 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.69■□□□□ 0.1
CDR2Q01850 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.69■□□□□ 0.1
CDR2Q01850 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDR2Q01850 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CDR2Q01850 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDR2Q01850 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDR2Q01850 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
CDR2Q01850 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CDR2Q01850 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.68■□□□□ 0.1
CDR2Q01850 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDR2Q01850 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.68■□□□□ 0.1
CDR2Q01850 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDR2Q01850 AC006001.1-201ENST00000325130 474 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms