Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 AC106760.1-201ENST00000508690 800 ntBASIC14.21□□□□□ -0.13
HMGCS1Q01581 AC068587.3-201ENST00000526613 355 ntBASIC14.21□□□□□ -0.13
HMGCS1Q01581 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMGCS1Q01581 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCS1Q01581 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCS1Q01581 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGCS1Q01581 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 HSPA8P5-201ENST00000456928 2069 ntBASIC14.2□□□□□ -0.14
HMGCS1Q01581 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 AP005018.1-201ENST00000525475 301 ntBASIC14.2□□□□□ -0.14
HMGCS1Q01581 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 AC103988.2-201ENST00000561804 725 ntBASIC14.2□□□□□ -0.14
HMGCS1Q01581 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 AL358472.5-202ENST00000641448 1267 ntBASIC14.2□□□□□ -0.14
HMGCS1Q01581 AC105233.6-201ENST00000642093 218 ntBASIC14.2□□□□□ -0.14
HMGCS1Q01581 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 AC139712.1-201ENST00000378256 1875 ntBASIC14.2□□□□□ -0.14
HMGCS1Q01581 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGCS1Q01581 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
HMGCS1Q01581 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms