Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
YBX1P67809 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
YBX1P67809 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.33□□□□□ -0.12
YBX1P67809 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 RPS2P32-201ENST00000439199 892 ntBASIC14.33□□□□□ -0.12
YBX1P67809 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.33□□□□□ -0.12
YBX1P67809 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
YBX1P67809 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 AC022447.6-201ENST00000515522 438 ntBASIC14.33□□□□□ -0.12
YBX1P67809 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.33□□□□□ -0.12
YBX1P67809 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 AC023310.1-201ENST00000554836 735 ntBASIC14.33□□□□□ -0.12
YBX1P67809 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.33□□□□□ -0.12
YBX1P67809 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.33□□□□□ -0.12
YBX1P67809 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
YBX1P67809 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.33□□□□□ -0.12
YBX1P67809 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
YBX1P67809 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.33□□□□□ -0.12
YBX1P67809 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
YBX1P67809 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 AC005252.3-201ENST00000623855 2258 ntBASIC14.32□□□□□ -0.12
YBX1P67809 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 COL6A4P2-202ENST00000504443 2753 ntBASIC14.32□□□□□ -0.12
YBX1P67809 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.32□□□□□ -0.12
YBX1P67809 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 TLE1P1-201ENST00000422965 589 ntBASIC14.32□□□□□ -0.12
YBX1P67809 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 HIST2H2BB-201ENST00000449108 381 ntBASIC14.32□□□□□ -0.12
YBX1P67809 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.32□□□□□ -0.12
YBX1P67809 GCOM2-201ENST00000509133 1104 ntBASIC14.32□□□□□ -0.12
YBX1P67809 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.32□□□□□ -0.12
YBX1P67809 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.32□□□□□ -0.12
YBX1P67809 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 AC079316.1-201ENST00000548397 411 ntBASIC14.32□□□□□ -0.12
YBX1P67809 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
YBX1P67809 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.32□□□□□ -0.12
YBX1P67809 AC002472.3-201ENST00000640124 621 ntBASIC14.32□□□□□ -0.12
YBX1P67809 AL033527.4-201ENST00000641026 673 ntBASIC14.32□□□□□ -0.12
YBX1P67809 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
YBX1P67809 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
YBX1P67809 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
YBX1P67809 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms