Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.12□□□□□ -0.31
GFRA1P56159 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
GFRA1P56159 SORD2P-201ENST00000558556 1069 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 MIR3619-201ENST00000579667 83 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.12□□□□□ -0.31
GFRA1P56159 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.12□□□□□ -0.31
GFRA1P56159 MIR6074-201ENST00000612054 107 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 AL157813.1-201ENST00000612996 587 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 AC018629.1-201ENST00000623381 1736 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
GFRA1P56159 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.12□□□□□ -0.31
GFRA1P56159 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.12□□□□□ -0.31
GFRA1P56159 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.12□□□□□ -0.31
GFRA1P56159 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.12□□□□□ -0.31
GFRA1P56159 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 AC067930.6-201ENST00000623257 4947 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GFRA1P56159 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
GFRA1P56159 NORAD-201ENST00000565493 5339 ntBASIC13.12□□□□□ -0.31
GFRA1P56159 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GFRA1P56159 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
GFRA1P56159 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.11□□□□□ -0.31
GFRA1P56159 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.11□□□□□ -0.31
GFRA1P56159 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.11□□□□□ -0.31
GFRA1P56159 ACTG1P2-201ENST00000415776 1125 ntBASIC13.11□□□□□ -0.31
GFRA1P56159 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 ACTG1P11-201ENST00000425411 1125 ntBASIC13.11□□□□□ -0.31
GFRA1P56159 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.11□□□□□ -0.31
GFRA1P56159 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.11□□□□□ -0.31
GFRA1P56159 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.11□□□□□ -0.31
GFRA1P56159 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 NAP1L6-202ENST00000641404 1222 ntBASIC13.11□□□□□ -0.31
GFRA1P56159 AC138627.1-207ENST00000641560 1006 ntBASIC13.11□□□□□ -0.31
GFRA1P56159 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.11□□□□□ -0.31
GFRA1P56159 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.11□□□□□ -0.31
GFRA1P56159 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GFRA1P56159 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.1□□□□□ -0.31
GFRA1P56159 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GFRA1P56159 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
GFRA1P56159 AC008132.1-202ENST00000342005 1389 ntBASIC13.1□□□□□ -0.31
GFRA1P56159 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms