Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH11P55287 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH11P55287 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH11P55287 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH11P55287 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.56□□□□□ -0.24
CDH11P55287 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 AC016397.2-201ENST00000624848 1985 ntBASIC13.56□□□□□ -0.24
CDH11P55287 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 AC005252.3-201ENST00000623855 2258 ntBASIC13.56□□□□□ -0.24
CDH11P55287 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 TMEM14DP-201ENST00000422205 345 ntBASIC13.56□□□□□ -0.24
CDH11P55287 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.56□□□□□ -0.24
CDH11P55287 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.56□□□□□ -0.24
CDH11P55287 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.56□□□□□ -0.24
CDH11P55287 RPL13AP25-201ENST00000484130 612 ntBASIC13.56□□□□□ -0.24
CDH11P55287 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.56□□□□□ -0.24
CDH11P55287 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.56□□□□□ -0.24
CDH11P55287 AC015936.2-201ENST00000593177 259 ntBASIC13.56□□□□□ -0.24
CDH11P55287 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.56□□□□□ -0.24
CDH11P55287 AC133539.2-201ENST00000604757 467 ntBASIC13.56□□□□□ -0.24
CDH11P55287 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDH11P55287 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH11P55287 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH11P55287 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH11P55287 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDH11P55287 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CDH11P55287 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH11P55287 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH11P55287 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.55□□□□□ -0.24
CDH11P55287 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 ACA64.2-201ENST00000459014 129 ntBASIC13.55□□□□□ -0.24
CDH11P55287 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.55□□□□□ -0.24
CDH11P55287 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.55□□□□□ -0.24
CDH11P55287 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CDH11P55287 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 MIR6752-201ENST00000618442 71 ntBASIC13.55□□□□□ -0.24
CDH11P55287 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH11P55287 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CDH11P55287 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.55□□□□□ -0.24
CDH11P55287 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CDH11P55287 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.55□□□□□ -0.24
CDH11P55287 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms