Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LIMK2P53671 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK2P53671 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
LIMK2P53671 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK2P53671 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.86□□□□□ -0.03
LIMK2P53671 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK2P53671 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK2P53671 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK2P53671 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 RN7SL832P-201ENST00000607781 1756 ntBASIC14.86□□□□□ -0.03
LIMK2P53671 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LIMK2P53671 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.86□□□□□ -0.03
LIMK2P53671 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.86□□□□□ -0.03
LIMK2P53671 DUX4L45-201ENST00000566406 1057 ntBASIC14.86□□□□□ -0.03
LIMK2P53671 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK2P53671 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.86□□□□□ -0.03
LIMK2P53671 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK2P53671 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LIMK2P53671 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 AC020910.6-201ENST00000623084 1459 ntBASIC14.86□□□□□ -0.03
LIMK2P53671 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK2P53671 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK2P53671 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK2P53671 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK2P53671 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LIMK2P53671 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK2P53671 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.85□□□□□ -0.03
LIMK2P53671 AC145423.3-201ENST00000615987 467 ntBASIC14.85□□□□□ -0.03
LIMK2P53671 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LIMK2P53671 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 AC011840.2-201ENST00000563063 1520 ntBASIC14.85□□□□□ -0.03
LIMK2P53671 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 AL138725.1-201ENST00000407347 1314 ntBASIC14.85□□□□□ -0.03
LIMK2P53671 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 MRPL37P1-201ENST00000592451 1337 ntBASIC14.85□□□□□ -0.03
LIMK2P53671 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK2P53671 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LIMK2P53671 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LIMK2P53671 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.84□□□□□ -0.03
LIMK2P53671 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LIMK2P53671 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms