Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
LHX2P50458 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.07□□□□□ -0.32
LHX2P50458 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LHX2P50458 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.07□□□□□ -0.32
LHX2P50458 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.07□□□□□ -0.32
LHX2P50458 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.07□□□□□ -0.32
LHX2P50458 ST13P19-201ENST00000442505 1124 ntBASIC13.07□□□□□ -0.32
LHX2P50458 Z97180.1-201ENST00000445173 988 ntBASIC13.07□□□□□ -0.32
LHX2P50458 AL596276.2-201ENST00000447525 331 ntBASIC13.07□□□□□ -0.32
LHX2P50458 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 AC024681.1-201ENST00000521917 487 ntBASIC13.07□□□□□ -0.32
LHX2P50458 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LHX2P50458 SORD2P-201ENST00000558556 1069 ntBASIC13.07□□□□□ -0.32
LHX2P50458 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.07□□□□□ -0.32
LHX2P50458 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.07□□□□□ -0.32
LHX2P50458 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
LHX2P50458 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
LHX2P50458 AC092299.1-201ENST00000632679 757 ntBASIC13.07□□□□□ -0.32
LHX2P50458 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
LHX2P50458 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LHX2P50458 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.07□□□□□ -0.32
LHX2P50458 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.07□□□□□ -0.32
LHX2P50458 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
LHX2P50458 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LHX2P50458 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 KRT8P21-201ENST00000430398 1491 ntBASIC13.06□□□□□ -0.32
LHX2P50458 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 OR2R1P-201ENST00000441404 914 ntBASIC13.06□□□□□ -0.32
LHX2P50458 AC090857.1-201ENST00000527400 390 ntBASIC13.06□□□□□ -0.32
LHX2P50458 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.06□□□□□ -0.32
LHX2P50458 PGAM1P5-201ENST00000548011 764 ntBASIC13.06□□□□□ -0.32
LHX2P50458 AL161670.2-201ENST00000557650 1227 ntBASIC13.06□□□□□ -0.32
LHX2P50458 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.06□□□□□ -0.32
LHX2P50458 AC124068.2-201ENST00000569473 1109 ntBASIC13.06□□□□□ -0.32
LHX2P50458 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 MIR6074-201ENST00000612054 107 ntBASIC13.06□□□□□ -0.32
LHX2P50458 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.06□□□□□ -0.32
LHX2P50458 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.06□□□□□ -0.32
LHX2P50458 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LHX2P50458 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LHX2P50458 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.06□□□□□ -0.32
LHX2P50458 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms