Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPT1AP50416 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.11■□□□□ 0.17
CPT1AP50416 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.11■□□□□ 0.17
CPT1AP50416 PIN4P1-201ENST00000451079 396 ntBASIC16.11■□□□□ 0.17
CPT1AP50416 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CPT1AP50416 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.11■□□□□ 0.17
CPT1AP50416 AP000911.2-201ENST00000534330 502 ntBASIC16.11■□□□□ 0.17
CPT1AP50416 AC005586.2-201ENST00000563946 837 ntBASIC16.11■□□□□ 0.17
CPT1AP50416 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CPT1AP50416 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.11■□□□□ 0.17
CPT1AP50416 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CPT1AP50416 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.11■□□□□ 0.17
CPT1AP50416 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.11■□□□□ 0.17
CPT1AP50416 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CPT1AP50416 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 AC018442.1-201ENST00000421439 2061 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CPT1AP50416 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 LAP3P2-201ENST00000454686 1454 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.1■□□□□ 0.17
CPT1AP50416 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.1■□□□□ 0.17
CPT1AP50416 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.1■□□□□ 0.17
CPT1AP50416 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CPT1AP50416 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CPT1AP50416 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CPT1AP50416 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.1■□□□□ 0.17
CPT1AP50416 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 MIR645-201ENST00000385283 94 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 GUSBP10-201ENST00000417412 665 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 ALG1L13P-202ENST00000519320 584 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPT1AP50416 HERC2P11-201ENST00000562845 725 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 AC100756.2-201ENST00000569537 736 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.1■□□□□ 0.17
CPT1AP50416 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.1■□□□□ 0.17
CPT1AP50416 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.1■□□□□ 0.17
CPT1AP50416 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.1■□□□□ 0.17
CPT1AP50416 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 AC091951.1-201ENST00000512854 2465 ntBASIC16.1■□□□□ 0.17
CPT1AP50416 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.1■□□□□ 0.17
CPT1AP50416 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.1■□□□□ 0.17
CPT1AP50416 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CPT1AP50416 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
CPT1AP50416 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPT1AP50416 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPT1AP50416 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.09■□□□□ 0.17
CPT1AP50416 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPT1AP50416 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.09■□□□□ 0.17
CPT1AP50416 AC097065.1-201ENST00000425737 517 ntBASIC16.09■□□□□ 0.17
CPT1AP50416 ERP29P1-201ENST00000442902 706 ntBASIC16.09■□□□□ 0.17
CPT1AP50416 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms