Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRNA4P43681 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNA4P43681 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA4P43681 AL355994.2-201ENST00000447882 704 ntBASIC14.84□□□□□ -0.03
CHRNA4P43681 CSF2RBP1-201ENST00000447905 391 ntBASIC14.84□□□□□ -0.03
CHRNA4P43681 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 HOMER2P2-201ENST00000451621 847 ntBASIC14.84□□□□□ -0.03
CHRNA4P43681 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.84□□□□□ -0.03
CHRNA4P43681 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRNA4P43681 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRNA4P43681 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.84□□□□□ -0.03
CHRNA4P43681 MIR4741-201ENST00000579822 90 ntBASIC14.84□□□□□ -0.03
CHRNA4P43681 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNA4P43681 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA4P43681 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNA4P43681 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNA4P43681 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.84□□□□□ -0.03
CHRNA4P43681 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHRNA4P43681 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA4P43681 AL023775.1-201ENST00000454907 1746 ntBASIC14.83□□□□□ -0.03
CHRNA4P43681 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA4P43681 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA4P43681 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA4P43681 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA4P43681 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA4P43681 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CHRNA4P43681 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CHRNA4P43681 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA4P43681 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CHRNA4P43681 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 MIR658-201ENST00000385210 100 ntBASIC14.83□□□□□ -0.04
CHRNA4P43681 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA4P43681 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.83□□□□□ -0.04
CHRNA4P43681 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.83□□□□□ -0.04
CHRNA4P43681 IGHV3-71-201ENST00000523324 359 ntBASIC14.83□□□□□ -0.04
CHRNA4P43681 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA4P43681 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CHRNA4P43681 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.83□□□□□ -0.04
CHRNA4P43681 AC079316.1-201ENST00000548397 411 ntBASIC14.83□□□□□ -0.04
CHRNA4P43681 AC023310.1-201ENST00000554836 735 ntBASIC14.83□□□□□ -0.04
CHRNA4P43681 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CHRNA4P43681 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.83□□□□□ -0.04
CHRNA4P43681 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.83□□□□□ -0.04
CHRNA4P43681 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA4P43681 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.83□□□□□ -0.04
CHRNA4P43681 E2F3P2-201ENST00000447755 1422 ntBASIC14.83□□□□□ -0.04
CHRNA4P43681 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CHRNA4P43681 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA4P43681 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA4P43681 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CHRNA4P43681 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CHRNA4P43681 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.82□□□□□ -0.04
CHRNA4P43681 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 MIR326-201ENST00000362220 95 ntBASIC14.82□□□□□ -0.04
CHRNA4P43681 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.82□□□□□ -0.04
CHRNA4P43681 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.82□□□□□ -0.04
CHRNA4P43681 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CHRNA4P43681 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms