Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 KRT8P28-201ENST00000433288 1390 ntBASIC13.31□□□□□ -0.28
APOBEC1P41238 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.31□□□□□ -0.28
APOBEC1P41238 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.31□□□□□ -0.28
APOBEC1P41238 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APOBEC1P41238 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
APOBEC1P41238 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
APOBEC1P41238 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.3□□□□□ -0.28
APOBEC1P41238 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.3□□□□□ -0.28
APOBEC1P41238 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 AC119751.2-201ENST00000504529 210 ntBASIC13.3□□□□□ -0.28
APOBEC1P41238 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 AC027237.1-201ENST00000560942 655 ntBASIC13.3□□□□□ -0.28
APOBEC1P41238 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 EEF1DP1-201ENST00000585891 896 ntBASIC13.3□□□□□ -0.28
APOBEC1P41238 AC010328.2-201ENST00000597698 1111 ntBASIC13.3□□□□□ -0.28
APOBEC1P41238 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
APOBEC1P41238 RN7SL832P-201ENST00000607781 1756 ntBASIC13.3□□□□□ -0.28
APOBEC1P41238 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
APOBEC1P41238 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
APOBEC1P41238 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms