Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RFC1P35251 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.54■□□□□ 0.08
RFC1P35251 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.54■□□□□ 0.08
RFC1P35251 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 AC139712.1-201ENST00000378256 1875 ntBASIC15.54■□□□□ 0.08
RFC1P35251 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 AC215219.1-201ENST00000400706 1817 ntBASIC15.54■□□□□ 0.08
RFC1P35251 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFC1P35251 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFC1P35251 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 PDIA3P1-201ENST00000471856 1510 ntBASIC15.53■□□□□ 0.08
RFC1P35251 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 AC152010.1-201ENST00000415779 2006 ntBASIC15.53■□□□□ 0.08
RFC1P35251 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 AC012617.1-204ENST00000586340 2305 ntBASIC15.53■□□□□ 0.08
RFC1P35251 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.53■□□□□ 0.08
RFC1P35251 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RFC1P35251 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RFC1P35251 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RFC1P35251 AP000812.2-201ENST00000538934 718 ntBASIC15.53■□□□□ 0.08
RFC1P35251 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.53■□□□□ 0.08
RFC1P35251 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.53■□□□□ 0.08
RFC1P35251 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.53■□□□□ 0.08
RFC1P35251 AC073413.1-201ENST00000603927 732 ntBASIC15.53■□□□□ 0.08
RFC1P35251 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.53■□□□□ 0.08
RFC1P35251 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.53■□□□□ 0.08
RFC1P35251 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.53■□□□□ 0.08
RFC1P35251 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.53■□□□□ 0.08
RFC1P35251 AL354989.2-201ENST00000435838 1540 ntBASIC15.53■□□□□ 0.08
RFC1P35251 AL731571.1-201ENST00000617058 5428 ntBASIC15.53■□□□□ 0.08
RFC1P35251 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RFC1P35251 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RFC1P35251 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RFC1P35251 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.52■□□□□ 0.08
RFC1P35251 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.52■□□□□ 0.08
RFC1P35251 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RFC1P35251 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
RFC1P35251 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RFC1P35251 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.52■□□□□ 0.08
RFC1P35251 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 MIR1202-201ENST00000408529 83 ntBASIC15.52■□□□□ 0.08
RFC1P35251 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RFC1P35251 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.52■□□□□ 0.08
RFC1P35251 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.52■□□□□ 0.08
RFC1P35251 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
RFC1P35251 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.52■□□□□ 0.08
RFC1P35251 PUDPP3-201ENST00000445368 636 ntBASIC15.52■□□□□ 0.08
RFC1P35251 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RFC1P35251 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.52■□□□□ 0.08
RFC1P35251 COX5BP1-201ENST00000507622 393 ntBASIC15.52■□□□□ 0.08
RFC1P35251 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.52■□□□□ 0.08
RFC1P35251 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.52■□□□□ 0.08
RFC1P35251 RN7SL713P-201ENST00000582127 302 ntBASIC15.52■□□□□ 0.08
RFC1P35251 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.52■□□□□ 0.08
RFC1P35251 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms