Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RPA3P35244 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.93□□□□□ -0.02
RPA3P35244 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPA3P35244 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RPA3P35244 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 C1QBPP1-201ENST00000400117 770 ntBASIC14.92□□□□□ -0.02
RPA3P35244 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.92□□□□□ -0.02
RPA3P35244 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.92□□□□□ -0.02
RPA3P35244 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 CTBP2P3-201ENST00000585629 1255 ntBASIC14.92□□□□□ -0.02
RPA3P35244 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.92□□□□□ -0.02
RPA3P35244 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
RPA3P35244 AC093813.1-201ENST00000605066 256 ntBASIC14.92□□□□□ -0.02
RPA3P35244 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 AC126335.2-201ENST00000623362 4637 ntBASIC14.92□□□□□ -0.02
RPA3P35244 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.92□□□□□ -0.02
RPA3P35244 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.92□□□□□ -0.02
RPA3P35244 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RPA3P35244 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.91□□□□□ -0.02
RPA3P35244 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.91□□□□□ -0.02
RPA3P35244 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RPA3P35244 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RPA3P35244 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 DGCR5-201ENST00000399539 862 ntBASIC14.91□□□□□ -0.02
RPA3P35244 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.91□□□□□ -0.02
RPA3P35244 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.91□□□□□ -0.02
RPA3P35244 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 AL359711.2-201ENST00000563105 872 ntBASIC14.91□□□□□ -0.02
RPA3P35244 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.91□□□□□ -0.02
RPA3P35244 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.91□□□□□ -0.02
RPA3P35244 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RPA3P35244 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms