Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC19.39■□□□□ 0.69
USP6P35125 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 AC021305.1-201ENST00000520656 1514 ntBASIC19.39■□□□□ 0.69
USP6P35125 KRT8P43-201ENST00000406052 1458 ntBASIC19.39■□□□□ 0.69
USP6P35125 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.39■□□□□ 0.69
USP6P35125 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 RPL3P2-204ENST00000413027 1203 ntBASIC19.39■□□□□ 0.69
USP6P35125 AC024293.1-201ENST00000467930 498 ntBASIC19.39■□□□□ 0.69
USP6P35125 AC145285.5-201ENST00000562217 361 ntBASIC19.39■□□□□ 0.69
USP6P35125 SNORD3B-1-201ENST00000577988 758 ntBASIC19.39■□□□□ 0.69
USP6P35125 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP6P35125 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6P35125 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 CICP14-201ENST00000629111 2732 ntBASIC19.38■□□□□ 0.69
USP6P35125 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP6P35125 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
USP6P35125 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
USP6P35125 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 NHP2-202ENST00000314397 599 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
USP6P35125 CHCHD2P2-201ENST00000503744 321 ntBASIC19.38■□□□□ 0.69
USP6P35125 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC19.38■□□□□ 0.69
USP6P35125 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.38■□□□□ 0.69
USP6P35125 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.38■□□□□ 0.69
USP6P35125 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 AP005264.5-201ENST00000590066 467 ntBASIC19.38■□□□□ 0.69
USP6P35125 HPX-213ENST00000615166 826 ntTSL 5 BASIC19.38■□□□□ 0.69
USP6P35125 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.38■□□□□ 0.69
USP6P35125 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 AC091769.1-201ENST00000619576 568 ntBASIC19.38■□□□□ 0.69
USP6P35125 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.38■□□□□ 0.69
USP6P35125 AC002472.4-201ENST00000641915 272 ntBASIC19.38■□□□□ 0.69
USP6P35125 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.38■□□□□ 0.69
USP6P35125 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP6P35125 AL672207.1-201ENST00000328462 1570 ntBASIC19.38■□□□□ 0.69
USP6P35125 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
USP6P35125 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 MSANTD2P1-201ENST00000445341 1368 ntBASIC19.37■□□□□ 0.69
USP6P35125 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.37■□□□□ 0.69
USP6P35125 SHMT1P1-201ENST00000419974 1312 ntBASIC19.37■□□□□ 0.69
USP6P35125 CTBP2P8-201ENST00000422584 1330 ntBASIC19.37■□□□□ 0.69
USP6P35125 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
USP6P35125 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.37■□□□□ 0.69
USP6P35125 AQP7P5-201ENST00000428759 1049 ntBASIC19.37■□□□□ 0.69
USP6P35125 AQP7P4-201ENST00000447083 1042 ntBASIC19.37■□□□□ 0.69
USP6P35125 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP6P35125 AQP7P2-201ENST00000453967 1041 ntBASIC19.37■□□□□ 0.69
USP6P35125 AC006529.1-201ENST00000459978 637 ntBASIC19.37■□□□□ 0.69
USP6P35125 AC025186.1-201ENST00000478174 870 ntBASIC19.37■□□□□ 0.69
USP6P35125 HINT1-205ENST00000508488 703 ntTSL 2 BASIC19.37■□□□□ 0.69
USP6P35125 NSD1-211ENST00000511258 809 ntTSL 3 BASIC19.37■□□□□ 0.69
USP6P35125 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.37■□□□□ 0.69
USP6P35125 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC19.37■□□□□ 0.69
USP6P35125 NT5C-204ENST00000578337 582 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms