Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SHC1P29353 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.56□□□□□ -0.24
SHC1P29353 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.56□□□□□ -0.24
SHC1P29353 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SHC1P29353 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHC1P29353 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 TPM3P8-201ENST00000330554 643 ntBASIC13.55□□□□□ -0.24
SHC1P29353 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 GK-202ENST00000378941 458 ntTSL 3 BASIC13.55□□□□□ -0.24
SHC1P29353 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.55□□□□□ -0.24
SHC1P29353 AC026954.1-201ENST00000429771 1293 ntBASIC13.55□□□□□ -0.24
SHC1P29353 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.55□□□□□ -0.24
SHC1P29353 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
SHC1P29353 KLF2P4-201ENST00000451959 1225 ntBASIC13.55□□□□□ -0.24
SHC1P29353 RNA5SP486-201ENST00000515961 83 ntBASIC13.55□□□□□ -0.24
SHC1P29353 AP000812.2-201ENST00000538934 718 ntBASIC13.55□□□□□ -0.24
SHC1P29353 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.55□□□□□ -0.24
SHC1P29353 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.55□□□□□ -0.24
SHC1P29353 AL603764.1-201ENST00000636452 321 ntBASIC13.55□□□□□ -0.24
SHC1P29353 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
SHC1P29353 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.55□□□□□ -0.24
SHC1P29353 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.55□□□□□ -0.24
SHC1P29353 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.55□□□□□ -0.24
SHC1P29353 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SHC1P29353 AC015802.1-201ENST00000588104 1449 ntBASIC13.55□□□□□ -0.24
SHC1P29353 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 INE2-201ENST00000630399 1874 ntBASIC13.55□□□□□ -0.24
SHC1P29353 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SHC1P29353 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SHC1P29353 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SHC1P29353 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 AC126335.2-201ENST00000623362 4637 ntBASIC13.54□□□□□ -0.24
SHC1P29353 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SHC1P29353 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.54□□□□□ -0.24
SHC1P29353 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHC1P29353 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SHC1P29353 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 MIR658-201ENST00000385210 100 ntBASIC13.54□□□□□ -0.24
SHC1P29353 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.54□□□□□ -0.24
SHC1P29353 BOLA2P3-201ENST00000404566 256 ntBASIC13.54□□□□□ -0.24
SHC1P29353 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.54□□□□□ -0.24
SHC1P29353 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.54□□□□□ -0.24
SHC1P29353 ATP5G2P4-201ENST00000442175 420 ntBASIC13.54□□□□□ -0.24
SHC1P29353 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.54□□□□□ -0.24
SHC1P29353 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SHC1P29353 AL391280.1-201ENST00000506969 1062 ntBASIC13.54□□□□□ -0.24
SHC1P29353 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.54□□□□□ -0.24
SHC1P29353 AC104989.1-201ENST00000519711 778 ntBASIC13.54□□□□□ -0.24
SHC1P29353 AP003171.2-201ENST00000528208 925 ntBASIC13.54□□□□□ -0.24
SHC1P29353 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms