Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 AC006001.1-201ENST00000325130 474 ntBASIC14.15□□□□□ -0.14
PTX3P26022 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.15□□□□□ -0.14
PTX3P26022 AL035633.1-201ENST00000406139 838 ntBASIC14.15□□□□□ -0.14
PTX3P26022 ARSEP1-201ENST00000420443 635 ntBASIC14.15□□□□□ -0.14
PTX3P26022 AL590640.2-201ENST00000457038 527 ntBASIC14.15□□□□□ -0.14
PTX3P26022 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.15□□□□□ -0.14
PTX3P26022 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.15□□□□□ -0.14
PTX3P26022 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.15□□□□□ -0.14
PTX3P26022 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.15□□□□□ -0.14
PTX3P26022 AC078819.1-201ENST00000547454 765 ntBASIC14.15□□□□□ -0.14
PTX3P26022 AC012085.1-201ENST00000548270 765 ntBASIC14.15□□□□□ -0.14
PTX3P26022 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.15□□□□□ -0.14
PTX3P26022 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.15□□□□□ -0.14
PTX3P26022 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.15□□□□□ -0.14
PTX3P26022 AC138951.2-201ENST00000623455 1161 ntBASIC14.15□□□□□ -0.14
PTX3P26022 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
PTX3P26022 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PTX3P26022 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.15□□□□□ -0.14
PTX3P26022 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 AL354989.2-201ENST00000435838 1540 ntBASIC14.15□□□□□ -0.14
PTX3P26022 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PTX3P26022 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.15□□□□□ -0.15
PTX3P26022 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.14□□□□□ -0.15
PTX3P26022 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.14□□□□□ -0.15
PTX3P26022 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.14□□□□□ -0.15
PTX3P26022 KRT90P-201ENST00000549264 1064 ntBASIC14.14□□□□□ -0.15
PTX3P26022 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
PTX3P26022 RN7SL713P-201ENST00000582127 302 ntBASIC14.14□□□□□ -0.15
PTX3P26022 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.14□□□□□ -0.15
PTX3P26022 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 ST20-AS1-201ENST00000560255 4223 ntBASIC14.14□□□□□ -0.15
PTX3P26022 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PTX3P26022 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.14□□□□□ -0.15
PTX3P26022 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.14□□□□□ -0.15
PTX3P26022 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.14□□□□□ -0.15
PTX3P26022 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PTX3P26022 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 AC009093.2-202ENST00000620513 2079 ntBASIC14.13□□□□□ -0.15
PTX3P26022 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PTX3P26022 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.13□□□□□ -0.15
PTX3P26022 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.13□□□□□ -0.15
PTX3P26022 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
PTX3P26022 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms