Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO1P25800 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LMO1P25800 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.37□□□□□ -0.43
LMO1P25800 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LMO1P25800 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO1P25800 TTTY23B-201ENST00000442790 549 ntBASIC12.36□□□□□ -0.43
LMO1P25800 BCRP2-202ENST00000447763 634 ntBASIC12.36□□□□□ -0.43
LMO1P25800 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
LMO1P25800 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO1P25800 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO1P25800 BCRP6-201ENST00000510112 632 ntBASIC12.36□□□□□ -0.43
LMO1P25800 BCRP7-201ENST00000511549 544 ntBASIC12.36□□□□□ -0.43
LMO1P25800 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO1P25800 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO1P25800 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.36□□□□□ -0.43
LMO1P25800 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 AC130686.1-201ENST00000622936 2466 ntBASIC12.36□□□□□ -0.43
LMO1P25800 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LMO1P25800 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LMO1P25800 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.36□□□□□ -0.43
LMO1P25800 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LMO1P25800 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 AC020910.6-201ENST00000623084 1459 ntBASIC12.35□□□□□ -0.43
LMO1P25800 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 AC009093.2-202ENST00000620513 2079 ntBASIC12.35□□□□□ -0.43
LMO1P25800 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 AC006001.1-201ENST00000325130 474 ntBASIC12.35□□□□□ -0.43
LMO1P25800 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LMO1P25800 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO1P25800 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LMO1P25800 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 FTH1P14-201ENST00000482930 551 ntBASIC12.35□□□□□ -0.43
LMO1P25800 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.35□□□□□ -0.43
LMO1P25800 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO1P25800 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO1P25800 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LMO1P25800 AP003171.2-201ENST00000528208 925 ntBASIC12.35□□□□□ -0.43
LMO1P25800 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
LMO1P25800 SORD2P-201ENST00000558556 1069 ntBASIC12.35□□□□□ -0.43
LMO1P25800 AC132938.2-201ENST00000579188 680 ntBASIC12.35□□□□□ -0.43
LMO1P25800 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO1P25800 ECM1P1-201ENST00000604092 1279 ntBASIC12.35□□□□□ -0.43
LMO1P25800 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.35□□□□□ -0.43
LMO1P25800 MIR6752-201ENST00000618442 71 ntBASIC12.35□□□□□ -0.43
LMO1P25800 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.35□□□□□ -0.43
LMO1P25800 AL591163.1-201ENST00000641757 987 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms