Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHMP24386 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHMP24386 CICP17-201ENST00000418553 2377 ntBASIC13.83□□□□□ -0.19
CHMP24386 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHMP24386 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHMP24386 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CHMP24386 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CHMP24386 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CHMP24386 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CHMP24386 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.83□□□□□ -0.2
CHMP24386 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.83□□□□□ -0.2
CHMP24386 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 ACTBP8-201ENST00000403258 1108 ntBASIC13.83□□□□□ -0.2
CHMP24386 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.83□□□□□ -0.2
CHMP24386 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.83□□□□□ -0.2
CHMP24386 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.83□□□□□ -0.2
CHMP24386 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CHMP24386 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.83□□□□□ -0.2
CHMP24386 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CHMP24386 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CHMP24386 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CHMP24386 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 AC092933.1-201ENST00000393644 945 ntBASIC13.82□□□□□ -0.2
CHMP24386 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 AL139094.1-201ENST00000405549 1188 ntBASIC13.82□□□□□ -0.2
CHMP24386 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 KLF2P2-201ENST00000416807 1039 ntBASIC13.82□□□□□ -0.2
CHMP24386 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 BCRP2-202ENST00000447763 634 ntBASIC13.82□□□□□ -0.2
CHMP24386 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.82□□□□□ -0.2
CHMP24386 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.82□□□□□ -0.2
CHMP24386 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.82□□□□□ -0.2
CHMP24386 BCRP6-201ENST00000510112 632 ntBASIC13.82□□□□□ -0.2
CHMP24386 BCRP7-201ENST00000511549 544 ntBASIC13.82□□□□□ -0.2
CHMP24386 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.82□□□□□ -0.2
CHMP24386 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.82□□□□□ -0.2
CHMP24386 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.82□□□□□ -0.2
CHMP24386 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CHMP24386 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.82□□□□□ -0.2
CHMP24386 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 KRT8P35-201ENST00000483942 1338 ntBASIC13.82□□□□□ -0.2
CHMP24386 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CHMP24386 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms