Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 MST1P2-201ENST00000457982 2291 ntBASIC12.54□□□□□ -0.4
BCL3P20749 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.54□□□□□ -0.4
BCL3P20749 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 TPM3P8-201ENST00000330554 643 ntBASIC12.54□□□□□ -0.4
BCL3P20749 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.54□□□□□ -0.4
BCL3P20749 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.54□□□□□ -0.4
BCL3P20749 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 AL355864.2-201ENST00000447420 863 ntBASIC12.54□□□□□ -0.4
BCL3P20749 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.54□□□□□ -0.4
BCL3P20749 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.54□□□□□ -0.4
BCL3P20749 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.54□□□□□ -0.4
BCL3P20749 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.54□□□□□ -0.4
BCL3P20749 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 CICP4-201ENST00000447359 2812 ntBASIC12.54□□□□□ -0.4
BCL3P20749 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BCL3P20749 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.54□□□□□ -0.4
BCL3P20749 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.54□□□□□ -0.4
BCL3P20749 AC087386.2-201ENST00000623212 4637 ntBASIC12.54□□□□□ -0.4
BCL3P20749 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.53□□□□□ -0.4
BCL3P20749 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
BCL3P20749 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.53□□□□□ -0.4
BCL3P20749 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.53□□□□□ -0.4
BCL3P20749 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.53□□□□□ -0.4
BCL3P20749 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.53□□□□□ -0.4
BCL3P20749 RN7SL752P-201ENST00000463779 287 ntBASIC12.53□□□□□ -0.4
BCL3P20749 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.53□□□□□ -0.4
BCL3P20749 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 AP001889.1-201ENST00000525414 633 ntBASIC12.53□□□□□ -0.4
BCL3P20749 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.53□□□□□ -0.4
BCL3P20749 AC103988.2-201ENST00000561804 725 ntBASIC12.53□□□□□ -0.4
BCL3P20749 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.53□□□□□ -0.4
BCL3P20749 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 ECM1P1-201ENST00000604092 1279 ntBASIC12.53□□□□□ -0.4
BCL3P20749 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.53□□□□□ -0.4
BCL3P20749 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 AC011474.4-201ENST00000623523 2076 ntBASIC12.53□□□□□ -0.4
BCL3P20749 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.53□□□□□ -0.4
BCL3P20749 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.53□□□□□ -0.4
BCL3P20749 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BCL3P20749 AC020910.6-201ENST00000623084 1459 ntBASIC12.53□□□□□ -0.4
BCL3P20749 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms