Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 GK-202ENST00000378941 458 ntTSL 3 BASIC15.13■□□□□ 0.01
ERCC2P18074 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.13■□□□□ 0.01
ERCC2P18074 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.13■□□□□ 0.01
ERCC2P18074 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 SORD2P-201ENST00000558556 1069 ntBASIC15.13■□□□□ 0.01
ERCC2P18074 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ERCC2P18074 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.13■□□□□ 0.01
ERCC2P18074 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.13■□□□□ 0.01
ERCC2P18074 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.13■□□□□ 0.01
ERCC2P18074 AC244157.2-201ENST00000616239 1006 ntBASIC15.13■□□□□ 0.01
ERCC2P18074 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.13■□□□□ 0.01
ERCC2P18074 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ERCC2P18074 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.13■□□□□ 0.01
ERCC2P18074 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.13■□□□□ 0.01
ERCC2P18074 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.13■□□□□ 0.01
ERCC2P18074 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ERCC2P18074 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.12■□□□□ 0.01
ERCC2P18074 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 AC009093.10-201ENST00000641956 1442 ntBASIC15.12■□□□□ 0.01
ERCC2P18074 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 AC079178.1-201ENST00000420915 656 ntBASIC15.12■□□□□ 0.01
ERCC2P18074 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.12■□□□□ 0.01
ERCC2P18074 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.12■□□□□ 0.01
ERCC2P18074 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.12■□□□□ 0.01
ERCC2P18074 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.12■□□□□ 0.01
ERCC2P18074 DUX4L46-201ENST00000566845 751 ntBASIC15.12■□□□□ 0.01
ERCC2P18074 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 MIR4783-201ENST00000580343 82 ntBASIC15.12■□□□□ 0.01
ERCC2P18074 EEF1DP1-201ENST00000585891 896 ntBASIC15.12■□□□□ 0.01
ERCC2P18074 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.12■□□□□ 0.01
ERCC2P18074 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ERCC2P18074 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ERCC2P18074 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.12■□□□□ 0.01
ERCC2P18074 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ERCC2P18074 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.11■□□□□ 0.01
ERCC2P18074 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ERCC2P18074 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ERCC2P18074 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ERCC2P18074 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.11■□□□□ 0.01
ERCC2P18074 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.11■□□□□ 0.01
ERCC2P18074 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ERCC2P18074 FAM21FP-201ENST00000426241 1131 ntBASIC15.11■□□□□ 0.01
ERCC2P18074 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms