Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.46■□□□□ 0.07
RARAP10276 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.46■□□□□ 0.07
RARAP10276 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RARAP10276 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.46■□□□□ 0.07
RARAP10276 AC233724.13-201ENST00000598383 410 ntBASIC15.46■□□□□ 0.07
RARAP10276 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RARAP10276 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.46■□□□□ 0.07
RARAP10276 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.46■□□□□ 0.07
RARAP10276 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RARAP10276 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RARAP10276 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RARAP10276 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RARAP10276 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RARAP10276 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.45■□□□□ 0.06
RARAP10276 ST20-AS1-201ENST00000560255 4223 ntBASIC15.45■□□□□ 0.06
RARAP10276 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 AC009093.2-202ENST00000620513 2079 ntBASIC15.45■□□□□ 0.06
RARAP10276 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RARAP10276 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.45■□□□□ 0.06
RARAP10276 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 CU639417.3-201ENST00000624240 1404 ntBASIC15.45■□□□□ 0.06
RARAP10276 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 AC011498.7-201ENST00000624986 2027 ntBASIC15.45■□□□□ 0.06
RARAP10276 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
RARAP10276 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
RARAP10276 COX5BP8-201ENST00000416911 349 ntBASIC15.45■□□□□ 0.06
RARAP10276 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.45■□□□□ 0.06
RARAP10276 AL590640.2-201ENST00000457038 527 ntBASIC15.45■□□□□ 0.06
RARAP10276 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 FTH1P14-201ENST00000482930 551 ntBASIC15.45■□□□□ 0.06
RARAP10276 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.45■□□□□ 0.06
RARAP10276 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.45■□□□□ 0.06
RARAP10276 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.45■□□□□ 0.06
RARAP10276 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.45■□□□□ 0.06
RARAP10276 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.45■□□□□ 0.06
RARAP10276 BTNL10-201ENST00000595971 695 ntBASIC15.45■□□□□ 0.06
RARAP10276 AL358472.5-202ENST00000641448 1267 ntBASIC15.45■□□□□ 0.06
RARAP10276 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
RARAP10276 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.45■□□□□ 0.06
RARAP10276 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RARAP10276 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RARAP10276 AL356585.2-201ENST00000625078 2396 ntBASIC15.44■□□□□ 0.06
RARAP10276 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RARAP10276 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
RARAP10276 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.44■□□□□ 0.06
RARAP10276 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 AP000593.2-201ENST00000542775 1433 ntBASIC15.44■□□□□ 0.06
RARAP10276 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.44■□□□□ 0.06
RARAP10276 AC015688.4-201ENST00000580780 1647 ntBASIC15.44■□□□□ 0.06
RARAP10276 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.44■□□□□ 0.06
RARAP10276 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.44■□□□□ 0.06
RARAP10276 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RARAP10276 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
RARAP10276 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.44■□□□□ 0.06
RARAP10276 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.44■□□□□ 0.06
RARAP10276 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.44■□□□□ 0.06
RARAP10276 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.44■□□□□ 0.06
RARAP10276 RNA5SP486-201ENST00000515961 83 ntBASIC15.44■□□□□ 0.06
RARAP10276 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.44■□□□□ 0.06
RARAP10276 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RARAP10276 AC106820.3-201ENST00000561653 397 ntBASIC15.44■□□□□ 0.06
RARAP10276 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.44■□□□□ 0.06
RARAP10276 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.44■□□□□ 0.06
RARAP10276 AL022328.1-201ENST00000610050 478 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms