Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CSF1P09603 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.82□□□□□ -0.36
CSF1P09603 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSF1P09603 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CSF1P09603 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CSF1P09603 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.82□□□□□ -0.36
CSF1P09603 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CSF1P09603 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CSF1P09603 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.82□□□□□ -0.36
CSF1P09603 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 PCDHA5-203ENST00000614258 4248 ntBASIC12.82□□□□□ -0.36
CSF1P09603 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CSF1P09603 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 AC012617.1-204ENST00000586340 2305 ntBASIC12.81□□□□□ -0.36
CSF1P09603 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.81□□□□□ -0.36
CSF1P09603 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 MRPS18AP1-201ENST00000414458 589 ntBASIC12.81□□□□□ -0.36
CSF1P09603 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 AC007274.1-201ENST00000439805 662 ntBASIC12.81□□□□□ -0.36
CSF1P09603 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.81□□□□□ -0.36
CSF1P09603 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.81□□□□□ -0.36
CSF1P09603 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.81□□□□□ -0.36
CSF1P09603 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.81□□□□□ -0.36
CSF1P09603 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 AL138828.2-201ENST00000615812 383 ntBASIC12.81□□□□□ -0.36
CSF1P09603 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.81□□□□□ -0.36
CSF1P09603 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 AL035456.1-201ENST00000456064 1369 ntBASIC12.81□□□□□ -0.36
CSF1P09603 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CSF1P09603 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CSF1P09603 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.81□□□□□ -0.36
CSF1P09603 STRCP1-201ENST00000509801 5328 ntBASIC12.81□□□□□ -0.36
CSF1P09603 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSF1P09603 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CSF1P09603 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CSF1P09603 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CSF1P09603 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSF1P09603 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CSF1P09603 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms