Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.23■□□□□ 0.03
CD48P09326 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.23■□□□□ 0.03
CD48P09326 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 AP000812.2-201ENST00000538934 718 ntBASIC15.23■□□□□ 0.03
CD48P09326 CR383656.12-201ENST00000549567 513 ntBASIC15.23■□□□□ 0.03
CD48P09326 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 AC010327.5-201ENST00000586923 3061 ntBASIC15.23■□□□□ 0.03
CD48P09326 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.22■□□□□ 0.03
CD48P09326 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 ANKRD19P-201ENST00000338192 862 ntBASIC15.22■□□□□ 0.03
CD48P09326 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.22■□□□□ 0.03
CD48P09326 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.22■□□□□ 0.03
CD48P09326 AC112492.5-201ENST00000421897 457 ntBASIC15.22■□□□□ 0.03
CD48P09326 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CD48P09326 RPL7P3-201ENST00000441388 714 ntBASIC15.22■□□□□ 0.03
CD48P09326 CHMP1AP1-201ENST00000445563 662 ntBASIC15.22■□□□□ 0.03
CD48P09326 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.22■□□□□ 0.03
CD48P09326 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.22■□□□□ 0.03
CD48P09326 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.22■□□□□ 0.03
CD48P09326 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.22■□□□□ 0.03
CD48P09326 PPY2P-201ENST00000582808 702 ntBASIC15.22■□□□□ 0.03
CD48P09326 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.22■□□□□ 0.03
CD48P09326 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CD48P09326 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.22■□□□□ 0.03
CD48P09326 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD48P09326 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CD48P09326 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 AHCYP2-201ENST00000430630 1300 ntBASIC15.21■□□□□ 0.03
CD48P09326 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.21■□□□□ 0.03
CD48P09326 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CD48P09326 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.21■□□□□ 0.03
CD48P09326 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CD48P09326 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD48P09326 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms