Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIOO75962 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIOO75962 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIOO75962 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIOO75962 URB1-AS1-201ENST00000534991 831 ntBASIC14.49□□□□□ -0.09
TRIOO75962 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIOO75962 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIOO75962 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIOO75962 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIOO75962 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIOO75962 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIOO75962 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TRIOO75962 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TRIOO75962 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIOO75962 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 ASS1P2-201ENST00000439895 1223 ntBASIC14.48□□□□□ -0.09
TRIOO75962 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIOO75962 RN7SL375P-201ENST00000492442 298 ntBASIC14.48□□□□□ -0.09
TRIOO75962 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIOO75962 RN7SL556P-201ENST00000582856 298 ntBASIC14.48□□□□□ -0.09
TRIOO75962 AL136982.5-201ENST00000605222 294 ntBASIC14.48□□□□□ -0.09
TRIOO75962 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC14.48□□□□□ -0.09
TRIOO75962 AC106782.5-201ENST00000616011 337 ntBASIC14.48□□□□□ -0.09
TRIOO75962 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIOO75962 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIOO75962 AL356000.1-201ENST00000441073 1238 ntBASIC14.48□□□□□ -0.09
TRIOO75962 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIOO75962 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.48□□□□□ -0.09
TRIOO75962 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIOO75962 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRIOO75962 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.48□□□□□ -0.09
TRIOO75962 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRIOO75962 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIOO75962 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIOO75962 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIOO75962 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIOO75962 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIOO75962 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIOO75962 EEF1GP8-201ENST00000506566 1154 ntBASIC14.47□□□□□ -0.09
TRIOO75962 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIOO75962 AC016582.2-202ENST00000587765 1094 ntBASIC14.47□□□□□ -0.09
TRIOO75962 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIOO75962 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIOO75962 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRIOO75962 GUCY2EP-203ENST00000531117 1918 ntBASIC14.47□□□□□ -0.09
TRIOO75962 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIOO75962 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
TRIOO75962 RPSAP12-201ENST00000435879 888 ntBASIC14.47□□□□□ -0.09
TRIOO75962 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIOO75962 TMA16-204ENST00000508268 608 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIOO75962 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.47□□□□□ -0.09
TRIOO75962 SNORD3B-1-201ENST00000577988 758 ntBASIC14.47□□□□□ -0.09
TRIOO75962 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIOO75962 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms