Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RFPL1O75677 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 AL138725.1-201ENST00000407347 1314 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.79□□□□□ -0.04
RFPL1O75677 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 AC134915.1-201ENST00000426461 574 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.79□□□□□ -0.04
RFPL1O75677 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.79□□□□□ -0.04
RFPL1O75677 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.79□□□□□ -0.04
RFPL1O75677 BNIP3P42-201ENST00000454982 569 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 USP32P1-208ENST00000506594 1164 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 AP001582.1-201ENST00000525856 295 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.79□□□□□ -0.04
RFPL1O75677 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.79□□□□□ -0.04
RFPL1O75677 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.79□□□□□ -0.04
RFPL1O75677 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.79□□□□□ -0.04
RFPL1O75677 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.79□□□□□ -0.04
RFPL1O75677 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.79□□□□□ -0.04
RFPL1O75677 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RFPL1O75677 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 BNIP3P29-201ENST00000598302 571 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RFPL1O75677 AC004466.1-201ENST00000599515 1080 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 AC011447.5-201ENST00000616168 564 ntBASIC14.79□□□□□ -0.04
RFPL1O75677 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RFPL1O75677 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.79□□□□□ -0.04
RFPL1O75677 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.79□□□□□ -0.04
RFPL1O75677 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFPL1O75677 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 AC107918.4-201ENST00000641966 3141 ntBASIC14.78□□□□□ -0.04
RFPL1O75677 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RFPL1O75677 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 AL365209.1-201ENST00000624418 6473 ntBASIC14.78□□□□□ -0.04
RFPL1O75677 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.78□□□□□ -0.04
RFPL1O75677 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 AL442647.2-201ENST00000429864 857 ntBASIC14.78□□□□□ -0.04
RFPL1O75677 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.78□□□□□ -0.04
RFPL1O75677 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.78□□□□□ -0.04
RFPL1O75677 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.78□□□□□ -0.04
RFPL1O75677 AC124283.3-201ENST00000570869 594 ntBASIC14.78□□□□□ -0.04
RFPL1O75677 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.78□□□□□ -0.04
RFPL1O75677 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.78□□□□□ -0.04
RFPL1O75677 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.78□□□□□ -0.04
RFPL1O75677 AC133539.2-201ENST00000604757 467 ntBASIC14.78□□□□□ -0.04
RFPL1O75677 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.78□□□□□ -0.04
RFPL1O75677 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFPL1O75677 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.78□□□□□ -0.04
RFPL1O75677 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms