Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SMAD6O43541 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SMAD6O43541 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SMAD6O43541 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SMAD6O43541 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD6O43541 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.79□□□□□ -0.04
SMAD6O43541 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.79□□□□□ -0.04
SMAD6O43541 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.79□□□□□ -0.04
SMAD6O43541 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SMAD6O43541 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMAD6O43541 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SMAD6O43541 AC027237.1-201ENST00000560942 655 ntBASIC14.79□□□□□ -0.04
SMAD6O43541 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.79□□□□□ -0.04
SMAD6O43541 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.79□□□□□ -0.04
SMAD6O43541 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.79□□□□□ -0.04
SMAD6O43541 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 AL021578.1-201ENST00000613646 709 ntBASIC14.79□□□□□ -0.04
SMAD6O43541 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SMAD6O43541 AC018629.1-201ENST00000623381 1736 ntBASIC14.79□□□□□ -0.04
SMAD6O43541 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SMAD6O43541 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SMAD6O43541 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.79□□□□□ -0.04
SMAD6O43541 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMAD6O43541 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD6O43541 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMAD6O43541 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 AL157791.1-201ENST00000553667 1699 ntBASIC14.78□□□□□ -0.04
SMAD6O43541 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD6O43541 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD6O43541 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.78□□□□□ -0.04
SMAD6O43541 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD6O43541 AC008132.1-202ENST00000342005 1389 ntBASIC14.78□□□□□ -0.04
SMAD6O43541 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SMAD6O43541 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.78□□□□□ -0.04
SMAD6O43541 RN7SL11P-201ENST00000471305 293 ntBASIC14.78□□□□□ -0.04
SMAD6O43541 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.78□□□□□ -0.04
SMAD6O43541 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.78□□□□□ -0.04
SMAD6O43541 AC003686.1-201ENST00000550956 1034 ntBASIC14.78□□□□□ -0.04
SMAD6O43541 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SMAD6O43541 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.78□□□□□ -0.04
SMAD6O43541 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SMAD6O43541 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.78□□□□□ -0.04
SMAD6O43541 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMAD6O43541 AL157813.1-201ENST00000612996 587 ntBASIC14.78□□□□□ -0.04
SMAD6O43541 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.78□□□□□ -0.04
SMAD6O43541 AC100757.4-201ENST00000626934 759 ntBASIC14.78□□□□□ -0.04
SMAD6O43541 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.78□□□□□ -0.04
SMAD6O43541 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD6O43541 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SMAD6O43541 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.78□□□□□ -0.04
SMAD6O43541 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMAD6O43541 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMAD6O43541 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.77□□□□□ -0.04
SMAD6O43541 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMAD6O43541 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMAD6O43541 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMAD6O43541 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMAD6O43541 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms