Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.28■□□□□ 0.68
APAF1O14727 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APAF1O14727 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC19.28■□□□□ 0.68
APAF1O14727 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
APAF1O14727 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
APAF1O14727 CYP4F23P-201ENST00000593402 1579 ntBASIC19.27■□□□□ 0.68
APAF1O14727 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 AC136759.1-202ENST00000530858 2194 ntBASIC19.27■□□□□ 0.68
APAF1O14727 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
APAF1O14727 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
APAF1O14727 MBLAC2-202ENST00000514906 1936 ntBASIC19.27■□□□□ 0.68
APAF1O14727 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
APAF1O14727 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.27■□□□□ 0.68
APAF1O14727 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
APAF1O14727 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
APAF1O14727 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
APAF1O14727 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.27■□□□□ 0.68
APAF1O14727 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.27■□□□□ 0.68
APAF1O14727 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
APAF1O14727 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC19.27■□□□□ 0.68
APAF1O14727 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.27■□□□□ 0.68
APAF1O14727 AC005324.6-201ENST00000587972 613 ntBASIC19.27■□□□□ 0.68
APAF1O14727 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.27■□□□□ 0.68
APAF1O14727 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.27■□□□□ 0.68
APAF1O14727 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.27■□□□□ 0.68
APAF1O14727 AC091271.1-201ENST00000611877 1162 ntBASIC19.27■□□□□ 0.68
APAF1O14727 AC022748.3-201ENST00000621828 275 ntBASIC19.27■□□□□ 0.68
APAF1O14727 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APAF1O14727 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.27■□□□□ 0.68
APAF1O14727 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APAF1O14727 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
APAF1O14727 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
APAF1O14727 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.27■□□□□ 0.67
APAF1O14727 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APAF1O14727 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
APAF1O14727 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
APAF1O14727 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
APAF1O14727 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC19.26■□□□□ 0.67
APAF1O14727 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
APAF1O14727 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
APAF1O14727 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
APAF1O14727 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.26■□□□□ 0.67
APAF1O14727 AL161932.2-201ENST00000435436 679 ntBASIC19.26■□□□□ 0.67
APAF1O14727 AC007274.1-201ENST00000439805 662 ntBASIC19.26■□□□□ 0.67
APAF1O14727 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 AC108725.1-201ENST00000495472 409 ntBASIC19.26■□□□□ 0.67
APAF1O14727 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.26■□□□□ 0.67
APAF1O14727 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.26■□□□□ 0.67
APAF1O14727 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.26■□□□□ 0.67
APAF1O14727 AC020910.6-201ENST00000623084 1459 ntBASIC19.26■□□□□ 0.67
APAF1O14727 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC19.26■□□□□ 0.67
APAF1O14727 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
APAF1O14727 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 AL161772.1-201ENST00000610494 4412 ntBASIC19.26■□□□□ 0.67
APAF1O14727 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
APAF1O14727 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APAF1O14727 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
APAF1O14727 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APAF1O14727 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.25■□□□□ 0.67
APAF1O14727 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APAF1O14727 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
APAF1O14727 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APAF1O14727 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC19.25■□□□□ 0.67
APAF1O14727 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APAF1O14727 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms