Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRIM38O00635 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.88□□□□□ -0.03
TRIM38O00635 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.88□□□□□ -0.03
TRIM38O00635 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.88□□□□□ -0.03
TRIM38O00635 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRIM38O00635 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM38O00635 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRIM38O00635 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.88□□□□□ -0.03
TRIM38O00635 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM38O00635 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.88□□□□□ -0.03
TRIM38O00635 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.88□□□□□ -0.03
TRIM38O00635 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM38O00635 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRIM38O00635 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRIM38O00635 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRIM38O00635 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 AC010327.5-201ENST00000586923 3061 ntBASIC14.88□□□□□ -0.03
TRIM38O00635 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.88□□□□□ -0.03
TRIM38O00635 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM38O00635 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM38O00635 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 AL137784.3-201ENST00000623858 2288 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM38O00635 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM38O00635 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 AC015656.1-201ENST00000624209 3578 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 KRT8P14-201ENST00000414254 1442 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
TRIM38O00635 AL645937.2-201ENST00000396808 931 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 EIF3FP3-201ENST00000434851 1086 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 FAM8A4P-201ENST00000435433 1213 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 POM121L10P-201ENST00000436994 1285 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 COX5BP1-201ENST00000507622 393 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM38O00635 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM38O00635 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM38O00635 AC106872.11-201ENST00000605838 421 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 AL451050.2-201ENST00000606967 682 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM38O00635 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM38O00635 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM38O00635 CICP11-201ENST00000434745 2827 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM38O00635 AC097359.2-201ENST00000604992 2389 ntBASIC14.87□□□□□ -0.03
TRIM38O00635 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM38O00635 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
TRIM38O00635 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRIM38O00635 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM38O00635 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM38O00635 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRIM38O00635 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM38O00635 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms