Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXN3O00409 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 AC011474.4-201ENST00000623523 2076 ntBASIC15.74■□□□□ 0.11
FOXN3O00409 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXN3O00409 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXN3O00409 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
FOXN3O00409 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 AHCYP2-201ENST00000430630 1300 ntBASIC15.73■□□□□ 0.11
FOXN3O00409 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXN3O00409 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.73■□□□□ 0.11
FOXN3O00409 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 RPL7P3-201ENST00000441388 714 ntBASIC15.73■□□□□ 0.11
FOXN3O00409 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
FOXN3O00409 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.73■□□□□ 0.11
FOXN3O00409 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.73■□□□□ 0.11
FOXN3O00409 AC027601.3-201ENST00000622907 509 ntBASIC15.73■□□□□ 0.11
FOXN3O00409 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXN3O00409 RHOXF1P1-202ENST00000635473 501 ntBASIC15.73■□□□□ 0.11
FOXN3O00409 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXN3O00409 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXN3O00409 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
FOXN3O00409 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC097376.2-205ENST00000610159 5334 ntBASIC15.72■□□□□ 0.11
FOXN3O00409 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
FOXN3O00409 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXN3O00409 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXN3O00409 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXN3O00409 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.72■□□□□ 0.11
FOXN3O00409 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXN3O00409 PPY2P-201ENST00000582808 702 ntBASIC15.72■□□□□ 0.11
FOXN3O00409 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXN3O00409 AC008825.2-201ENST00000603374 718 ntBASIC15.72■□□□□ 0.11
FOXN3O00409 ZACNP1-201ENST00000612259 710 ntBASIC15.72■□□□□ 0.11
FOXN3O00409 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.72■□□□□ 0.11
FOXN3O00409 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXN3O00409 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXN3O00409 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms