Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 YBX2P1-201ENST00000394192 760 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 FAM58CP-201ENST00000435741 640 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 SERBP1P3-201ENST00000459980 809 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 ALG1L8P-201ENST00000533887 760 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 AC145285.3-201ENST00000564603 959 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 KRT18P8-201ENST00000581937 1246 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 MEX3B-202ENST00000558133 4333 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 MARK2P9-201ENST00000430958 1727 ntBASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HMGB1P1B2RPK0 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 TIMM8BP1-201ENST00000452384 211 ntBASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 GAPDHP40-201ENST00000505218 1006 ntBASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 AL079307.3-201ENST00000556114 283 ntBASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 AC007967.4-201ENST00000614700 386 ntBASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HMGB1P1B2RPK0 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGB1P1B2RPK0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HMGB1P1B2RPK0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HMGB1P1B2RPK0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HMGB1P1B2RPK0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 MTND6P24-201ENST00000440466 518 ntBASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 AL592309.1-201ENST00000443127 649 ntBASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 AC079781.3-201ENST00000449110 356 ntBASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HMGB1P1B2RPK0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms