Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AC073592.8-201ENST00000624126 511 ntBASIC16.07■□□□□ 0.16
CCDC66A2RUB6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 LILRP1-201ENST00000444199 1370 ntBASIC16.07■□□□□ 0.16
CCDC66A2RUB6 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC66A2RUB6 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.06■□□□□ 0.16
CCDC66A2RUB6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AC109322.1-201ENST00000524499 1264 ntBASIC16.06■□□□□ 0.16
CCDC66A2RUB6 ZNF890P-202ENST00000530367 1156 ntBASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 TSN-212ENST00000536142 3328 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC66A2RUB6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 AC011700.1-201ENST00000610409 2627 ntBASIC16.05■□□□□ 0.16
CCDC66A2RUB6 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 STRCP1-201ENST00000509801 5328 ntBASIC16.05■□□□□ 0.16
CCDC66A2RUB6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC66A2RUB6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms