Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB3Q9Y5G1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGB3Q9Y5G1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 Z92544.1-202ENST00000571933 1220 ntBASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.48■■□□□ 1.03
PCDHGB3Q9Y5G1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDHGB3Q9Y5G1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 KRT18P24-201ENST00000344739 1156 ntBASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGB3Q9Y5G1 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB3Q9Y5G1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 THA1P-201ENST00000590384 1145 ntBASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB3Q9Y5G1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 GUSBP5-201ENST00000418136 578 ntBASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 AC120024.1-201ENST00000562672 995 ntBASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 AL022069.1-201ENST00000568025 1636 ntBASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGB3Q9Y5G1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
PCDHGB3Q9Y5G1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms