Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
PCDHB13Q9Y5F0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHB13Q9Y5F0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHB13Q9Y5F0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB13Q9Y5F0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB13Q9Y5F0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB13Q9Y5F0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB13Q9Y5F0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHB13Q9Y5F0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.1■■□□□ 1.61
PCDHB13Q9Y5F0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 TSPY9P-201ENST00000440215 945 ntBASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 TSPY11P-201ENST00000442607 1045 ntBASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 MTDHP2-201ENST00000601468 714 ntBASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHB13Q9Y5F0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PCDHB13Q9Y5F0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB13Q9Y5F0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB13Q9Y5F0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHB13Q9Y5F0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.08■■□□□ 1.61
PCDHB13Q9Y5F0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHB13Q9Y5F0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHB13Q9Y5F0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
PCDHB13Q9Y5F0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB13Q9Y5F0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB13Q9Y5F0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB13Q9Y5F0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHB13Q9Y5F0 GUSBP5-201ENST00000418136 578 ntBASIC25.07■■□□□ 1.6
PCDHB13Q9Y5F0 AC010997.5-201ENST00000609182 354 ntBASIC25.07■■□□□ 1.6
PCDHB13Q9Y5F0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
PCDHB13Q9Y5F0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHB13Q9Y5F0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB13Q9Y5F0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHB13Q9Y5F0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHB13Q9Y5F0 UNC93B8-201ENST00000511903 705 ntBASIC25.05■■□□□ 1.6
PCDHB13Q9Y5F0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHB13Q9Y5F0 AC005703.6-201ENST00000623265 1329 ntBASIC25.05■■□□□ 1.6
PCDHB13Q9Y5F0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PCDHB13Q9Y5F0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB13Q9Y5F0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.04■■□□□ 1.6
PCDHB13Q9Y5F0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHB13Q9Y5F0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB13Q9Y5F0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHB13Q9Y5F0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PCDHB13Q9Y5F0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms