Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB7Q9Y5E2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHB7Q9Y5E2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB7Q9Y5E2 AC104564.3-201ENST00000582367 638 ntBASIC24.7■■□□□ 1.54
PCDHB7Q9Y5E2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB7Q9Y5E2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHB7Q9Y5E2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB7Q9Y5E2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHB7Q9Y5E2 AL161729.1-201ENST00000604104 1402 ntBASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 AC099791.1-201ENST00000416440 715 ntBASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 MIR6821-201ENST00000617625 74 ntBASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 AC136469.2-201ENST00000623944 1028 ntBASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB7Q9Y5E2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 AC009086.3-201ENST00000623486 1008 ntBASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB7Q9Y5E2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 AC006455.2-201ENST00000429931 906 ntBASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB7Q9Y5E2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 IRS3P-201ENST00000223076 1006 ntBASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 AC097381.1-201ENST00000429019 1296 ntBASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 HLA-L-211ENST00000482052 1765 ntBASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB7Q9Y5E2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 MIR3181-201ENST00000578512 73 ntBASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB7Q9Y5E2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB7Q9Y5E2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB7Q9Y5E2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDHB7Q9Y5E2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHB7Q9Y5E2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHB7Q9Y5E2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.64■■□□□ 1.53
PCDHB7Q9Y5E2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 AC233992.3-201ENST00000607491 485 ntBASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB7Q9Y5E2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
PCDHB7Q9Y5E2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB7Q9Y5E2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHB7Q9Y5E2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB7Q9Y5E2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms