Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
NINLQ9Y2I6 AL136162.1-201ENST00000607711 1078 ntBASIC31.41■■■□□ 2.62
NINLQ9Y2I6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
NINLQ9Y2I6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NINLQ9Y2I6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
NINLQ9Y2I6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.4■■■□□ 2.62
NINLQ9Y2I6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
NINLQ9Y2I6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
NINLQ9Y2I6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.4■■■□□ 2.62
NINLQ9Y2I6 AL031432.3-201ENST00000607698 485 ntBASIC31.4■■■□□ 2.62
NINLQ9Y2I6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
NINLQ9Y2I6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NINLQ9Y2I6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
NINLQ9Y2I6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
NINLQ9Y2I6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.39■■■□□ 2.62
NINLQ9Y2I6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC31.39■■■□□ 2.62
NINLQ9Y2I6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
NINLQ9Y2I6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NINLQ9Y2I6 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.38■■■□□ 2.61
NINLQ9Y2I6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
NINLQ9Y2I6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
NINLQ9Y2I6 AC138932.3-201ENST00000567634 1902 ntBASIC31.38■■■□□ 2.61
NINLQ9Y2I6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.38■■■□□ 2.61
NINLQ9Y2I6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC31.38■■■□□ 2.61
NINLQ9Y2I6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NINLQ9Y2I6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.37■■■□□ 2.61
NINLQ9Y2I6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.37■■■□□ 2.61
NINLQ9Y2I6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NINLQ9Y2I6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
NINLQ9Y2I6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.37■■■□□ 2.61
NINLQ9Y2I6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
NINLQ9Y2I6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC31.37■■■□□ 2.61
NINLQ9Y2I6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NINLQ9Y2I6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
NINLQ9Y2I6 ZNRF2P3-201ENST00000424200 374 ntBASIC31.36■■■□□ 2.61
NINLQ9Y2I6 MIR5787-201ENST00000611784 55 ntBASIC31.36■■■□□ 2.61
NINLQ9Y2I6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
NINLQ9Y2I6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NINLQ9Y2I6 EDA-201ENST00000338901 1233 ntBASIC31.35■■■□□ 2.61
NINLQ9Y2I6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
NINLQ9Y2I6 PBX2P1-201ENST00000493219 1291 ntBASIC31.35■■■□□ 2.61
NINLQ9Y2I6 AC024257.2-201ENST00000549699 147 ntBASIC31.35■■■□□ 2.61
NINLQ9Y2I6 AC241377.3-202ENST00000626088 1088 ntBASIC31.35■■■□□ 2.61
NINLQ9Y2I6 AC241585.3-202ENST00000628937 1088 ntBASIC31.35■■■□□ 2.61
NINLQ9Y2I6 AC245100.8-202ENST00000629247 1058 ntBASIC31.35■■■□□ 2.61
NINLQ9Y2I6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NINLQ9Y2I6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NINLQ9Y2I6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
NINLQ9Y2I6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 AL138724.1-201ENST00000606771 1088 ntBASIC31.34■■■□□ 2.61
NINLQ9Y2I6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.34■■■□□ 2.61
NINLQ9Y2I6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NINLQ9Y2I6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.33■■■□□ 2.61
NINLQ9Y2I6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NINLQ9Y2I6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
NINLQ9Y2I6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NINLQ9Y2I6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
NINLQ9Y2I6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
NINLQ9Y2I6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
NINLQ9Y2I6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
NINLQ9Y2I6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
NINLQ9Y2I6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NINLQ9Y2I6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NINLQ9Y2I6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.31■■■□□ 2.6
NINLQ9Y2I6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NINLQ9Y2I6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.31■■■□□ 2.6
NINLQ9Y2I6 SUDS3P1-201ENST00000505831 966 ntBASIC31.31■■■□□ 2.6
NINLQ9Y2I6 AC011298.3-201ENST00000615796 283 ntBASIC31.31■■■□□ 2.6
NINLQ9Y2I6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
NINLQ9Y2I6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NINLQ9Y2I6 SYT6-210ENST00000641643 1587 ntBASIC31.31■■■□□ 2.6
NINLQ9Y2I6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NINLQ9Y2I6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
NINLQ9Y2I6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.3■■■□□ 2.6
NINLQ9Y2I6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.3■■■□□ 2.6
NINLQ9Y2I6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
NINLQ9Y2I6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.3■■■□□ 2.6
NINLQ9Y2I6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NINLQ9Y2I6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
NINLQ9Y2I6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.3■■■□□ 2.6
NINLQ9Y2I6 AC099791.2-201ENST00000605725 427 ntBASIC31.3■■■□□ 2.6
NINLQ9Y2I6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NINLQ9Y2I6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.29■■■□□ 2.6
NINLQ9Y2I6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
NINLQ9Y2I6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
NINLQ9Y2I6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
NINLQ9Y2I6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC31.29■■■□□ 2.6
NINLQ9Y2I6 SERBP1P1-201ENST00000396021 1160 ntBASIC31.29■■■□□ 2.6
NINLQ9Y2I6 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.29■■■□□ 2.6
NINLQ9Y2I6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
NINLQ9Y2I6 AC020928.2-201ENST00000588717 2197 ntBASIC31.28■■■□□ 2.6
NINLQ9Y2I6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
NINLQ9Y2I6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NINLQ9Y2I6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms