Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ERGIC3Q9Y282 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ERGIC3Q9Y282 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ERGIC3Q9Y282 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ERGIC3Q9Y282 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ERGIC3Q9Y282 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 GUSBP5-202ENST00000510805 1989 ntBASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 RPS2P35-201ENST00000443417 897 ntBASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ERGIC3Q9Y282 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 MIR3960-201ENST00000583311 91 ntBASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 ECEL1P1-201ENST00000373592 1742 ntBASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ERGIC3Q9Y282 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 ANOS2P-203ENST00000472227 1816 ntBASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.65■□□□□ 0.9
ERGIC3Q9Y282 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
ERGIC3Q9Y282 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ERGIC3Q9Y282 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
ERGIC3Q9Y282 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERGIC3Q9Y282 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERGIC3Q9Y282 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERGIC3Q9Y282 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERGIC3Q9Y282 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ERGIC3Q9Y282 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms