Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA6Q9UN73 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA6Q9UN73 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 AL356740.2-201ENST00000601559 647 ntBASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 ALDH1A3-203ENST00000557963 1670 ntBASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA6Q9UN73 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PCDHA6Q9UN73 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA6Q9UN73 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA6Q9UN73 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHA6Q9UN73 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA6Q9UN73 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.14■■□□□ 1.78
PCDHA6Q9UN73 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA6Q9UN73 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.14■■□□□ 1.77
PCDHA6Q9UN73 AC005703.6-201ENST00000623265 1329 ntBASIC26.14■■□□□ 1.77
PCDHA6Q9UN73 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA6Q9UN73 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PCDHA6Q9UN73 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA6Q9UN73 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHA6Q9UN73 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA6Q9UN73 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDHA6Q9UN73 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 AC131281.2-201ENST00000520478 145 ntBASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA6Q9UN73 AC008406.3-201ENST00000620001 1374 ntBASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA6Q9UN73 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA6Q9UN73 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms