Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNIH4Q9P003 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
CNIH4Q9P003 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CNIH4Q9P003 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CNIH4Q9P003 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CNIH4Q9P003 KRT16P3-201ENST00000439127 1283 ntBASIC21.24■□□□□ 0.99
CNIH4Q9P003 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.24■□□□□ 0.99
CNIH4Q9P003 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.24■□□□□ 0.99
CNIH4Q9P003 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNIH4Q9P003 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CNIH4Q9P003 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH4Q9P003 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CNIH4Q9P003 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH4Q9P003 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CNIH4Q9P003 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH4Q9P003 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CNIH4Q9P003 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.23■□□□□ 0.99
CNIH4Q9P003 MTDHP2-201ENST00000601468 714 ntBASIC21.23■□□□□ 0.99
CNIH4Q9P003 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.23■□□□□ 0.99
CNIH4Q9P003 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH4Q9P003 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH4Q9P003 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNIH4Q9P003 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH4Q9P003 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.22■□□□□ 0.99
CNIH4Q9P003 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CNIH4Q9P003 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CNIH4Q9P003 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.22■□□□□ 0.99
CNIH4Q9P003 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.22■□□□□ 0.99
CNIH4Q9P003 AC010997.5-201ENST00000609182 354 ntBASIC21.22■□□□□ 0.99
CNIH4Q9P003 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
CNIH4Q9P003 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CNIH4Q9P003 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNIH4Q9P003 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH4Q9P003 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH4Q9P003 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CNIH4Q9P003 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH4Q9P003 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.21■□□□□ 0.99
CNIH4Q9P003 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.21■□□□□ 0.99
CNIH4Q9P003 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.21■□□□□ 0.99
CNIH4Q9P003 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH4Q9P003 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CNIH4Q9P003 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH4Q9P003 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.21■□□□□ 0.99
CNIH4Q9P003 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.21■□□□□ 0.99
CNIH4Q9P003 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNIH4Q9P003 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
CNIH4Q9P003 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.2■□□□□ 0.98
CNIH4Q9P003 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH4Q9P003 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH4Q9P003 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH4Q9P003 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH4Q9P003 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH4Q9P003 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH4Q9P003 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNIH4Q9P003 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH4Q9P003 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH4Q9P003 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH4Q9P003 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH4Q9P003 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH4Q9P003 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH4Q9P003 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 SNX5-217ENST00000606557 1087 ntBASIC21.19■□□□□ 0.98
CNIH4Q9P003 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNIH4Q9P003 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.19■□□□□ 0.98
CNIH4Q9P003 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CNIH4Q9P003 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.18■□□□□ 0.98
CNIH4Q9P003 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNIH4Q9P003 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CNIH4Q9P003 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.18■□□□□ 0.98
CNIH4Q9P003 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNIH4Q9P003 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNIH4Q9P003 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.18■□□□□ 0.98
CNIH4Q9P003 AC131212.1-201ENST00000613771 668 ntBASIC21.18■□□□□ 0.98
CNIH4Q9P003 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.18■□□□□ 0.98
CNIH4Q9P003 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.18■□□□□ 0.98
CNIH4Q9P003 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.18■□□□□ 0.98
CNIH4Q9P003 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNIH4Q9P003 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNIH4Q9P003 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNIH4Q9P003 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNIH4Q9P003 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CNIH4Q9P003 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNIH4Q9P003 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNIH4Q9P003 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 MIR6722-201ENST00000617286 78 ntBASIC21.17■□□□□ 0.98
CNIH4Q9P003 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CNIH4Q9P003 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms