Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
TFCP2L1Q9NZI6 AC096887.2-201ENST00000623443 1957 ntBASIC29.29■■■□□ 2.28
TFCP2L1Q9NZI6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 NTF6G-201ENST00000591094 616 ntBASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 MIR6084-201ENST00000622012 110 ntBASIC29.28■■■□□ 2.28
TFCP2L1Q9NZI6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TFCP2L1Q9NZI6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
TFCP2L1Q9NZI6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.27■■■□□ 2.28
TFCP2L1Q9NZI6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TFCP2L1Q9NZI6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
TFCP2L1Q9NZI6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.28
TFCP2L1Q9NZI6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.28
TFCP2L1Q9NZI6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
TFCP2L1Q9NZI6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
TFCP2L1Q9NZI6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.26■■■□□ 2.27
TFCP2L1Q9NZI6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
TFCP2L1Q9NZI6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 CCDC92B-201ENST00000575506 885 ntBASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
TFCP2L1Q9NZI6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
TFCP2L1Q9NZI6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
TFCP2L1Q9NZI6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.24■■■□□ 2.27
TFCP2L1Q9NZI6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TFCP2L1Q9NZI6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TFCP2L1Q9NZI6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
TFCP2L1Q9NZI6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
TFCP2L1Q9NZI6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
TFCP2L1Q9NZI6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
TFCP2L1Q9NZI6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.22■■■□□ 2.27
TFCP2L1Q9NZI6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.22■■■□□ 2.27
TFCP2L1Q9NZI6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
TFCP2L1Q9NZI6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
TFCP2L1Q9NZI6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.21■■■□□ 2.27
TFCP2L1Q9NZI6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.21■■■□□ 2.27
TFCP2L1Q9NZI6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
TFCP2L1Q9NZI6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29.21■■■□□ 2.27
TFCP2L1Q9NZI6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC29.21■■■□□ 2.27
TFCP2L1Q9NZI6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
TFCP2L1Q9NZI6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.2■■■□□ 2.27
TFCP2L1Q9NZI6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
TFCP2L1Q9NZI6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
TFCP2L1Q9NZI6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
TFCP2L1Q9NZI6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TFCP2L1Q9NZI6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TFCP2L1Q9NZI6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
TFCP2L1Q9NZI6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TFCP2L1Q9NZI6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
TFCP2L1Q9NZI6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
TFCP2L1Q9NZI6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 ERN1-208ENST00000606895 2068 ntBASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TFCP2L1Q9NZI6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 AC012414.1-201ENST00000556676 535 ntBASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 pRNA.6-201ENST00000610482 90 ntBASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 pRNA.5-201ENST00000612139 90 ntBASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 pRNA.11-201ENST00000618423 90 ntBASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 pRNA.13-201ENST00000619112 90 ntBASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.18■■■□□ 2.26
TFCP2L1Q9NZI6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
TFCP2L1Q9NZI6 MIR572-201ENST00000384983 95 ntBASIC29.17■■■□□ 2.26
TFCP2L1Q9NZI6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.17■■■□□ 2.26
TFCP2L1Q9NZI6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.17■■■□□ 2.26
TFCP2L1Q9NZI6 KRT18P14-201ENST00000534205 1250 ntBASIC29.17■■■□□ 2.26
TFCP2L1Q9NZI6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.17■■■□□ 2.26
TFCP2L1Q9NZI6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
TFCP2L1Q9NZI6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 AL354811.1-201ENST00000610286 706 ntBASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.16■■■□□ 2.26
TFCP2L1Q9NZI6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
TFCP2L1Q9NZI6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.15■■■□□ 2.26
TFCP2L1Q9NZI6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
TFCP2L1Q9NZI6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
TFCP2L1Q9NZI6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms