Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CISHQ9NSE2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.38■■□□□ 1.49
CISHQ9NSE2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.38■■□□□ 1.49
CISHQ9NSE2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.38■■□□□ 1.49
CISHQ9NSE2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.38■■□□□ 1.49
CISHQ9NSE2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.38■■□□□ 1.49
CISHQ9NSE2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CISHQ9NSE2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CISHQ9NSE2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CISHQ9NSE2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.37■■□□□ 1.49
CISHQ9NSE2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CISHQ9NSE2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CISHQ9NSE2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CISHQ9NSE2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CISHQ9NSE2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CISHQ9NSE2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CISHQ9NSE2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CISHQ9NSE2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CISHQ9NSE2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.35■■□□□ 1.49
CISHQ9NSE2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CISHQ9NSE2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.35■■□□□ 1.49
CISHQ9NSE2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CISHQ9NSE2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CISHQ9NSE2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.35■■□□□ 1.49
CISHQ9NSE2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.35■■□□□ 1.49
CISHQ9NSE2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CISHQ9NSE2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.35■■□□□ 1.49
CISHQ9NSE2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.35■■□□□ 1.49
CISHQ9NSE2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CISHQ9NSE2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CISHQ9NSE2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CISHQ9NSE2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CISHQ9NSE2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.34■■□□□ 1.49
CISHQ9NSE2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CISHQ9NSE2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.34■■□□□ 1.49
CISHQ9NSE2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CISHQ9NSE2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.34■■□□□ 1.49
CISHQ9NSE2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.34■■□□□ 1.49
CISHQ9NSE2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CISHQ9NSE2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
CISHQ9NSE2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CISHQ9NSE2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 KRT16P3-201ENST00000439127 1283 ntBASIC24.33■■□□□ 1.49
CISHQ9NSE2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CISHQ9NSE2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.33■■□□□ 1.49
CISHQ9NSE2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CISHQ9NSE2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CISHQ9NSE2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CISHQ9NSE2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
CISHQ9NSE2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CISHQ9NSE2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CISHQ9NSE2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
CISHQ9NSE2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CISHQ9NSE2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CISHQ9NSE2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.31■■□□□ 1.48
CISHQ9NSE2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.31■■□□□ 1.48
CISHQ9NSE2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CISHQ9NSE2 AC005703.6-201ENST00000623265 1329 ntBASIC24.31■■□□□ 1.48
CISHQ9NSE2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CISHQ9NSE2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CISHQ9NSE2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CISHQ9NSE2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.3■■□□□ 1.48
CISHQ9NSE2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.3■■□□□ 1.48
CISHQ9NSE2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.3■■□□□ 1.48
CISHQ9NSE2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CISHQ9NSE2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CISHQ9NSE2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CISHQ9NSE2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CISHQ9NSE2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.29■■□□□ 1.48
CISHQ9NSE2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CISHQ9NSE2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CISHQ9NSE2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CISHQ9NSE2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CISHQ9NSE2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CISHQ9NSE2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.29■■□□□ 1.48
CISHQ9NSE2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CISHQ9NSE2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CISHQ9NSE2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.28■■□□□ 1.48
CISHQ9NSE2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CISHQ9NSE2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CISHQ9NSE2 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.28■■□□□ 1.48
CISHQ9NSE2 MIR6724-1-201ENST00000616420 92 ntBASIC24.28■■□□□ 1.48
CISHQ9NSE2 MIR6724-2-201ENST00000616483 92 ntBASIC24.28■■□□□ 1.48
CISHQ9NSE2 MIR6724-4-201ENST00000617390 92 ntBASIC24.28■■□□□ 1.48
CISHQ9NSE2 MIR6724-3-201ENST00000622482 92 ntBASIC24.28■■□□□ 1.48
CISHQ9NSE2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms