Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC42SE1Q9NRR8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 GUSBP5-202ENST00000510805 1989 ntBASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC42SE1Q9NRR8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC11.85□□□□□ -0.51
CDC42SE1Q9NRR8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CDC42SE1Q9NRR8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC11.83□□□□□ -0.52
CDC42SE1Q9NRR8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
CDC42SE1Q9NRR8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC42SE1Q9NRR8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms