Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
PTPN23Q9H3S7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC34.78■■■■□ 3.16
PTPN23Q9H3S7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC34.78■■■■□ 3.16
PTPN23Q9H3S7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC34.78■■■■□ 3.16
PTPN23Q9H3S7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 AP001330.3-201ENST00000520123 633 ntBASIC34.77■■■■□ 3.16
PTPN23Q9H3S7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC34.76■■■■□ 3.16
PTPN23Q9H3S7 AC138932.3-201ENST00000567634 1902 ntBASIC34.76■■■■□ 3.16
PTPN23Q9H3S7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC34.76■■■■□ 3.16
PTPN23Q9H3S7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
PTPN23Q9H3S7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
PTPN23Q9H3S7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
PTPN23Q9H3S7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC34.76■■■■□ 3.15
PTPN23Q9H3S7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
PTPN23Q9H3S7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC34.74■■■■□ 3.15
PTPN23Q9H3S7 SERBP1P1-201ENST00000396021 1160 ntBASIC34.74■■■■□ 3.15
PTPN23Q9H3S7 AC006455.2-201ENST00000429931 906 ntBASIC34.74■■■■□ 3.15
PTPN23Q9H3S7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC34.74■■■■□ 3.15
PTPN23Q9H3S7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC34.74■■■■□ 3.15
PTPN23Q9H3S7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 ALDH1A3-203ENST00000557963 1670 ntBASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 AC142381.3-201ENST00000568208 1670 ntBASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 ZNRF2P3-201ENST00000424200 374 ntBASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 AC099791.2-201ENST00000605725 427 ntBASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
PTPN23Q9H3S7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC34.72■■■■□ 3.15
PTPN23Q9H3S7 EDA-201ENST00000338901 1233 ntBASIC34.72■■■■□ 3.15
PTPN23Q9H3S7 DUX4L19-201ENST00000557448 1267 ntBASIC34.72■■■■□ 3.15
PTPN23Q9H3S7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC34.72■■■■□ 3.15
PTPN23Q9H3S7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC34.72■■■■□ 3.15
PTPN23Q9H3S7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
PTPN23Q9H3S7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
PTPN23Q9H3S7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
PTPN23Q9H3S7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
PTPN23Q9H3S7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
PTPN23Q9H3S7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
PTPN23Q9H3S7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
PTPN23Q9H3S7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
PTPN23Q9H3S7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
PTPN23Q9H3S7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC34.7■■■■□ 3.14
PTPN23Q9H3S7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC34.7■■■■□ 3.14
PTPN23Q9H3S7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 MIR939-201ENST00000401314 82 ntBASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 AC142381.2-201ENST00000566120 298 ntBASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 MIR4767-201ENST00000582827 78 ntBASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC34.69■■■■□ 3.14
PTPN23Q9H3S7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 AF213884.3-201ENST00000563833 479 ntBASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 AC011298.3-201ENST00000615796 283 ntBASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
PTPN23Q9H3S7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
PTPN23Q9H3S7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
PTPN23Q9H3S7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
PTPN23Q9H3S7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
PTPN23Q9H3S7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC34.67■■■■□ 3.14
PTPN23Q9H3S7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC34.67■■■■□ 3.14
PTPN23Q9H3S7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 AC020928.2-201ENST00000588717 2197 ntBASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 GRAMD4P4-201ENST00000613563 1115 ntBASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC34.66■■■■□ 3.14
PTPN23Q9H3S7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC34.65■■■■□ 3.14
PTPN23Q9H3S7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
PTPN23Q9H3S7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
PTPN23Q9H3S7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
PTPN23Q9H3S7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
PTPN23Q9H3S7 SYT6-210ENST00000641643 1587 ntBASIC34.64■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms