Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ALX4Q9H161 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ALX4Q9H161 RARRES2P2-201ENST00000394842 485 ntBASIC19.22■□□□□ 0.67
ALX4Q9H161 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX4Q9H161 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.22■□□□□ 0.67
ALX4Q9H161 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALX4Q9H161 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALX4Q9H161 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX4Q9H161 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX4Q9H161 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
ALX4Q9H161 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALX4Q9H161 RNF126P1-201ENST00000567452 1320 ntBASIC19.21■□□□□ 0.67
ALX4Q9H161 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ALX4Q9H161 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALX4Q9H161 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALX4Q9H161 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALX4Q9H161 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.2■□□□□ 0.66
ALX4Q9H161 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALX4Q9H161 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALX4Q9H161 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALX4Q9H161 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX4Q9H161 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALX4Q9H161 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX4Q9H161 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALX4Q9H161 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ALX4Q9H161 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.19■□□□□ 0.66
ALX4Q9H161 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX4Q9H161 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX4Q9H161 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.19■□□□□ 0.66
ALX4Q9H161 AC242852.2-201ENST00000615738 1807 ntBASIC19.18■□□□□ 0.66
ALX4Q9H161 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.18■□□□□ 0.66
ALX4Q9H161 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.18■□□□□ 0.66
ALX4Q9H161 AL157400.5-201ENST00000507624 621 ntBASIC19.18■□□□□ 0.66
ALX4Q9H161 AC092296.2-201ENST00000589470 999 ntBASIC19.18■□□□□ 0.66
ALX4Q9H161 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.18■□□□□ 0.66
ALX4Q9H161 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX4Q9H161 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ALX4Q9H161 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.17■□□□□ 0.66
ALX4Q9H161 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALX4Q9H161 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
ALX4Q9H161 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALX4Q9H161 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALX4Q9H161 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.17■□□□□ 0.66
ALX4Q9H161 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.17■□□□□ 0.66
ALX4Q9H161 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.17■□□□□ 0.66
ALX4Q9H161 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.17■□□□□ 0.66
ALX4Q9H161 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALX4Q9H161 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX4Q9H161 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ALX4Q9H161 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ALX4Q9H161 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ALX4Q9H161 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.16■□□□□ 0.66
ALX4Q9H161 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX4Q9H161 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ALX4Q9H161 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ALX4Q9H161 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ALX4Q9H161 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.15■□□□□ 0.66
ALX4Q9H161 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.15■□□□□ 0.66
ALX4Q9H161 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 ESRRAP2-201ENST00000418437 1549 ntBASIC19.15■□□□□ 0.66
ALX4Q9H161 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX4Q9H161 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALX4Q9H161 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALX4Q9H161 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.14■□□□□ 0.65
ALX4Q9H161 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALX4Q9H161 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ALX4Q9H161 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.14■□□□□ 0.65
ALX4Q9H161 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
ALX4Q9H161 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.14■□□□□ 0.65
ALX4Q9H161 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALX4Q9H161 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ALX4Q9H161 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALX4Q9H161 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALX4Q9H161 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALX4Q9H161 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALX4Q9H161 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
ALX4Q9H161 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ALX4Q9H161 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALX4Q9H161 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ALX4Q9H161 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms