Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP1Q96SZ6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP1Q96SZ6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP1Q96SZ6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP1Q96SZ6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDK5RAP1Q96SZ6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK5RAP1Q96SZ6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CDK5RAP1Q96SZ6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.72■■□□□ 1.39
CDK5RAP1Q96SZ6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK5RAP1Q96SZ6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK5RAP1Q96SZ6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDK5RAP1Q96SZ6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CDK5RAP1Q96SZ6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDK5RAP1Q96SZ6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.7■■□□□ 1.39
CDK5RAP1Q96SZ6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDK5RAP1Q96SZ6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDK5RAP1Q96SZ6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
CDK5RAP1Q96SZ6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.7■■□□□ 1.38
CDK5RAP1Q96SZ6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.7■■□□□ 1.38
CDK5RAP1Q96SZ6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
CDK5RAP1Q96SZ6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDK5RAP1Q96SZ6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 LINC00543-201ENST00000567234 1845 ntBASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDK5RAP1Q96SZ6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 AC092171.4-201ENST00000609130 632 ntBASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDK5RAP1Q96SZ6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 AC009102.2-201ENST00000606772 1639 ntBASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDK5RAP1Q96SZ6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDK5RAP1Q96SZ6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CDK5RAP1Q96SZ6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.66■■□□□ 1.38
CDK5RAP1Q96SZ6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.66■■□□□ 1.38
CDK5RAP1Q96SZ6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CDK5RAP1Q96SZ6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDK5RAP1Q96SZ6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDK5RAP1Q96SZ6 AL139125.2-201ENST00000623134 1869 ntBASIC23.64■■□□□ 1.38
CDK5RAP1Q96SZ6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDK5RAP1Q96SZ6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDK5RAP1Q96SZ6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDK5RAP1Q96SZ6 DUX4L19-201ENST00000557448 1267 ntBASIC23.64■■□□□ 1.37
CDK5RAP1Q96SZ6 AL139246.5-201ENST00000606645 996 ntBASIC23.64■■□□□ 1.37
CDK5RAP1Q96SZ6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CDK5RAP1Q96SZ6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.64■■□□□ 1.37
CDK5RAP1Q96SZ6 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.64■■□□□ 1.37
CDK5RAP1Q96SZ6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CDK5RAP1Q96SZ6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 LINC01124-201ENST00000409786 2117 ntBASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 C17orf82-201ENST00000623772 1530 ntBASIC23.63■■□□□ 1.37
CDK5RAP1Q96SZ6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms