Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GAFA1Q96PS6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 CD72-202ENST00000378430 585 ntTSL 3 BASIC19■□□□□ 0.63
GAFA1Q96PS6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19■□□□□ 0.63
GAFA1Q96PS6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19■□□□□ 0.63
GAFA1Q96PS6 KRT16P3-201ENST00000439127 1283 ntBASIC19■□□□□ 0.63
GAFA1Q96PS6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
GAFA1Q96PS6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19■□□□□ 0.63
GAFA1Q96PS6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19■□□□□ 0.63
GAFA1Q96PS6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GAFA1Q96PS6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GAFA1Q96PS6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GAFA1Q96PS6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAFA1Q96PS6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAFA1Q96PS6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAFA1Q96PS6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GAFA1Q96PS6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAFA1Q96PS6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAFA1Q96PS6 AC005703.6-201ENST00000623265 1329 ntBASIC18.97■□□□□ 0.63
GAFA1Q96PS6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GAFA1Q96PS6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.96■□□□□ 0.63
GAFA1Q96PS6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.96■□□□□ 0.63
GAFA1Q96PS6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 MIR6724-1-201ENST00000616420 92 ntBASIC18.95■□□□□ 0.62
GAFA1Q96PS6 MIR6724-2-201ENST00000616483 92 ntBASIC18.95■□□□□ 0.62
GAFA1Q96PS6 MIR6724-4-201ENST00000617390 92 ntBASIC18.95■□□□□ 0.62
GAFA1Q96PS6 MIR6724-3-201ENST00000622482 92 ntBASIC18.95■□□□□ 0.62
GAFA1Q96PS6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.95■□□□□ 0.62
GAFA1Q96PS6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 AL356441.2-201ENST00000443009 864 ntBASIC18.94■□□□□ 0.62
GAFA1Q96PS6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
GAFA1Q96PS6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GAFA1Q96PS6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GAFA1Q96PS6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GAFA1Q96PS6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GAFA1Q96PS6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.92■□□□□ 0.62
GAFA1Q96PS6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms