Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 AC103724.3-201ENST00000564481 992 ntBASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXN4Q96NZ1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXN4Q96NZ1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
FOXN4Q96NZ1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN4Q96NZ1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
FOXN4Q96NZ1 AC022616.5-201ENST00000518796 181 ntBASIC20.33■□□□□ 0.85
FOXN4Q96NZ1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FOXN4Q96NZ1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.33■□□□□ 0.84
FOXN4Q96NZ1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXN4Q96NZ1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 AC131274.2-201ENST00000580697 1507 ntBASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXN4Q96NZ1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 THA1P-201ENST00000590384 1145 ntBASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 AL031848.2-201ENST00000607670 837 ntBASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 AL022069.1-201ENST00000568025 1636 ntBASIC20.31■□□□□ 0.84
FOXN4Q96NZ1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXN4Q96NZ1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FOXN4Q96NZ1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 MIR4281-201ENST00000580852 62 ntBASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.28■□□□□ 0.84
FOXN4Q96NZ1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
FOXN4Q96NZ1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN4Q96NZ1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
FOXN4Q96NZ1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
FOXN4Q96NZ1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
FOXN4Q96NZ1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXN4Q96NZ1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms