Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.92■■□□□ 1.58
LRCH3Q96II8 FOXO3B-201ENST00000395675 1928 ntBASIC24.92■■□□□ 1.58
LRCH3Q96II8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.92■■□□□ 1.58
LRCH3Q96II8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.91■■□□□ 1.58
LRCH3Q96II8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.91■■□□□ 1.58
LRCH3Q96II8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
LRCH3Q96II8 AC006455.2-201ENST00000429931 906 ntBASIC24.91■■□□□ 1.58
LRCH3Q96II8 AC006015.1-201ENST00000429970 570 ntBASIC24.91■■□□□ 1.58
LRCH3Q96II8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.91■■□□□ 1.58
LRCH3Q96II8 TERF1P2-201ENST00000583350 1212 ntBASIC24.91■■□□□ 1.58
LRCH3Q96II8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
LRCH3Q96II8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LRCH3Q96II8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
LRCH3Q96II8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRCH3Q96II8 AC090877.2-201ENST00000558441 1738 ntBASIC24.9■■□□□ 1.58
LRCH3Q96II8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRCH3Q96II8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRCH3Q96II8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.9■■□□□ 1.58
LRCH3Q96II8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LRCH3Q96II8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
LRCH3Q96II8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.89■■□□□ 1.58
LRCH3Q96II8 AC012414.1-201ENST00000556676 535 ntBASIC24.89■■□□□ 1.58
LRCH3Q96II8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
LRCH3Q96II8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.89■■□□□ 1.57
LRCH3Q96II8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.89■■□□□ 1.57
LRCH3Q96II8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRCH3Q96II8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.88■■□□□ 1.57
LRCH3Q96II8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
LRCH3Q96II8 AC006970.2-201ENST00000450065 779 ntBASIC24.88■■□□□ 1.57
LRCH3Q96II8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
LRCH3Q96II8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRCH3Q96II8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRCH3Q96II8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
LRCH3Q96II8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRCH3Q96II8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRCH3Q96II8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
LRCH3Q96II8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.87■■□□□ 1.57
LRCH3Q96II8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
LRCH3Q96II8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
LRCH3Q96II8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LRCH3Q96II8 AL121749.1-202ENST00000609313 2153 ntBASIC24.86■■□□□ 1.57
LRCH3Q96II8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRCH3Q96II8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.86■■□□□ 1.57
LRCH3Q96II8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.86■■□□□ 1.57
LRCH3Q96II8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.86■■□□□ 1.57
LRCH3Q96II8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
LRCH3Q96II8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRCH3Q96II8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRCH3Q96II8 CROCCP5-201ENST00000436658 830 ntBASIC24.85■■□□□ 1.57
LRCH3Q96II8 MIR3181-201ENST00000578512 73 ntBASIC24.85■■□□□ 1.57
LRCH3Q96II8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.85■■□□□ 1.57
LRCH3Q96II8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRCH3Q96II8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRCH3Q96II8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRCH3Q96II8 AC009102.2-201ENST00000606772 1639 ntBASIC24.84■■□□□ 1.57
LRCH3Q96II8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRCH3Q96II8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LRCH3Q96II8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.84■■□□□ 1.57
LRCH3Q96II8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRCH3Q96II8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.84■■□□□ 1.57
LRCH3Q96II8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.83■■□□□ 1.57
LRCH3Q96II8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRCH3Q96II8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
LRCH3Q96II8 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.83■■□□□ 1.57
LRCH3Q96II8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.83■■□□□ 1.57
LRCH3Q96II8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRCH3Q96II8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRCH3Q96II8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRCH3Q96II8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 AC016769.1-201ENST00000409132 1010 ntBASIC24.82■■□□□ 1.56
LRCH3Q96II8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRCH3Q96II8 AL354811.1-201ENST00000610286 706 ntBASIC24.82■■□□□ 1.56
LRCH3Q96II8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.82■■□□□ 1.56
LRCH3Q96II8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRCH3Q96II8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LRCH3Q96II8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LRCH3Q96II8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRCH3Q96II8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.81■■□□□ 1.56
LRCH3Q96II8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRCH3Q96II8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRCH3Q96II8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRCH3Q96II8 LINC02228-203ENST00000641970 1355 ntBASIC24.8■■□□□ 1.56
LRCH3Q96II8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.8■■□□□ 1.56
LRCH3Q96II8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
LRCH3Q96II8 MIR572-201ENST00000384983 95 ntBASIC24.8■■□□□ 1.56
LRCH3Q96II8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms