Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APH1AQ96BI3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APH1AQ96BI3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
APH1AQ96BI3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.17■□□□□ 0.82
APH1AQ96BI3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.17■□□□□ 0.82
APH1AQ96BI3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
APH1AQ96BI3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
APH1AQ96BI3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.16■□□□□ 0.82
APH1AQ96BI3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APH1AQ96BI3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APH1AQ96BI3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APH1AQ96BI3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.16■□□□□ 0.82
APH1AQ96BI3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.16■□□□□ 0.82
APH1AQ96BI3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
APH1AQ96BI3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.16■□□□□ 0.82
APH1AQ96BI3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
APH1AQ96BI3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
APH1AQ96BI3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APH1AQ96BI3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
APH1AQ96BI3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APH1AQ96BI3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APH1AQ96BI3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APH1AQ96BI3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APH1AQ96BI3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APH1AQ96BI3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
APH1AQ96BI3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APH1AQ96BI3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.13■□□□□ 0.81
APH1AQ96BI3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APH1AQ96BI3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APH1AQ96BI3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.12■□□□□ 0.81
APH1AQ96BI3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APH1AQ96BI3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APH1AQ96BI3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
APH1AQ96BI3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APH1AQ96BI3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.12■□□□□ 0.81
APH1AQ96BI3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.12■□□□□ 0.81
APH1AQ96BI3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APH1AQ96BI3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.12■□□□□ 0.81
APH1AQ96BI3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
APH1AQ96BI3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APH1AQ96BI3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
APH1AQ96BI3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
APH1AQ96BI3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 AC004812.2-201ENST00000611079 2094 ntBASIC20.11■□□□□ 0.81
APH1AQ96BI3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
APH1AQ96BI3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
APH1AQ96BI3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
APH1AQ96BI3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
APH1AQ96BI3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
APH1AQ96BI3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
APH1AQ96BI3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.1■□□□□ 0.81
APH1AQ96BI3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.1■□□□□ 0.81
APH1AQ96BI3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
APH1AQ96BI3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms