Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOBEC3DQ96AK3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOBEC3DQ96AK3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
APOBEC3DQ96AK3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.71■□□□□ 0.75
APOBEC3DQ96AK3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
APOBEC3DQ96AK3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 AC239859.2-201ENST00000444165 318 ntBASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 AC092028.1-203ENST00000608262 953 ntBASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
APOBEC3DQ96AK3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 MIR4787-201ENST00000607364 84 ntBASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.69■□□□□ 0.74
APOBEC3DQ96AK3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 MIR6722-201ENST00000617286 78 ntBASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
APOBEC3DQ96AK3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
APOBEC3DQ96AK3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC3DQ96AK3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC3DQ96AK3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
APOBEC3DQ96AK3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
APOBEC3DQ96AK3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
APOBEC3DQ96AK3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 AL035685.1-201ENST00000636663 812 ntBASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
APOBEC3DQ96AK3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC3DQ96AK3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC3DQ96AK3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC3DQ96AK3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC3DQ96AK3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC3DQ96AK3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms